G161285


Basic Information

Item Value
gene id G161285
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 19508243 ~ 19508522 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU203034
CTGTGGCTCTCGGGTGGGCGGCTTCCCTCTCCGGCTGGATGCCGTGGTGGTGGTGATCTCCATGATGGAGGTGGACGTCTCGGACTGGTTGGCTGTGGCGCTGGACTCGGTGGTCATGGACGACGGCGACTCCCCCACCAGCCGCACGCTGCCCTCGATCTTGATGTTGGGTTCGTTCTCGGCCGCCATGTTGAGCACCTTCAGCCCGTTGTAGTACAGGCCAGAGAGCTGGCCCTGGAACGGGCGGCCCCTGTCCTTCCCCCCGATTTTTATAGTGGTT

Function

GO:

id name namespace
GO:0006816 calcium ion transport biological_process
GO:0045202 synapse cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU203034 True 280 lncRNA 0.64 1 19508243 19508522

Neighbor

gene id symbol gene type direction distance location
AMCG00001915 NA coding upstream 65929 19441990 ~ 19442314 (+)
AMCG00001921 NA coding upstream 222356 19276693 ~ 19285887 (+)
AMCG00001920 NA coding upstream 238584 19260178 ~ 19269659 (+)
AMCG00001924 NA coding upstream 252930 19254800 ~ 19255313 (+)
AMCG00001923 NA coding upstream 253549 19244816 ~ 19254694 (+)
AMCG00001926 NA coding downstream 441930 19950452 ~ 19969912 (+)
AMCG00001937 NA coding downstream 573191 20081713 ~ 20087467 (+)
AMCG00001936 LOC107739892 coding downstream 581115 20089637 ~ 20096591 (+)
AMCG00001935 NA coding downstream 625624 20134146 ~ 20167777 (+)
AMCG00001932 thbs2 coding downstream 693987 20202509 ~ 20223949 (+)
G161282 NA non-coding upstream 50491 19455088 ~ 19457752 (+)
G161170 NA non-coding upstream 584571 18923449 ~ 18923672 (+)
G160985 NA non-coding upstream 1289212 18218764 ~ 18219031 (+)
G160943 NA non-coding upstream 1468869 18038704 ~ 18039374 (+)
G160939 NA non-coding upstream 1478427 18024196 ~ 18029816 (+)
G161392 NA non-coding downstream 727655 20236177 ~ 20236391 (+)
G161469 NA non-coding downstream 966149 20474671 ~ 20474889 (+)
AMCG00001889 cript,LOC107582781,LOC107728714 other upstream 606525 18899337 ~ 18901718 (+)
AMCG00001880 NA other upstream 834428 18663995 ~ 18673815 (+)
AMCG00001883 NA other upstream 1291105 18210009 ~ 18217138 (+)
AMCG00001881 NA other upstream 1298852 18187902 ~ 18209391 (+)
AMCG00001846 NA other upstream 2045309 17417351 ~ 17462934 (+)

Expression


Co-expression Network