G161471 (if3ei,eif3l,LOC106576896)


Basic Information

Item Value
gene id G161471
gene name if3ei,eif3l,LOC106576896
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 20475928 ~ 20478231 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU203244
TCCTCTTGCTCGTTTGGCATCTTATCACTAAGCGATCTGAGAATCATATCCAGGCTGTccaatcaaacattttacagCATAAATTAATTAACCTGAGGTTCAATAGTTCTATGCTCATTagtttcatttcaaaacatttctatgACATCATTGTTTGATCTTCCTGTGGAATAAGTCTTCAAATACACATGTACTGTGCTGCTAATCCACACTTACTGCTGCTAATCCACACTTATGTACAAAACCACTGATGGAACAATTCAACAGGAAAGCTTTACTATTTGACAATGGAAAGGATTTAATTACAGTACTAAACTCTCCATgagtgacaaaataaaacacaagataaagtagcaaaaacaaatctattcaTGTCTGAGATAAAGGACGAGCAGGACTACACCTGCAGCTGCTTATTAGAGGACCAATTAGCGCACAATCAGGACTCACTCAGAATGTAGTTGAAGAGATTGCAGTAATTGTAATATGACTCAAACCTCTGGTCCAGAGTCGGCCCCCCCGCTGACTTTCGCATAGATGTGTCTGTAGTACAGCTCTTTATACAGAATCAAGAACACTGCATCTGTGAGGAATACAAATCAAGTTACTTAAGAATATTAGAACTTCAATGCACATGTATCCAAAACATTTAATCCTGCTGAAAACGGGGAGAACAAACGCACTGGTAGTTGATTCAAGGTGTCCCTTGAGGAGAAGGCTCTGAGCAGGATCATCTCTGTTTCCTGTGCAGTGTAAAAGCTCAGAGGATTAAGGAGAGGATCAAGTAGTACAGAGATGCATCACAGGGCAACAACAATGTCAGTCATGCACAACAatgcaacagcagcaacaacgtTCAAATACTCGACCTTAAGAAATACAGTTCTGCTGGAGAGTTTCTCCTGGGCTAAACATTGGTTCCTGGTCAGAATCTAAATATTGCATCTGAAAGCAAAGTAAGAATAGACACAGGAGGCCACAGTCTCTAAGCTTAcattatacagatatatatatacctatctATATCTACACaaagattatataaaatactagAATTTAACATTATCCAAGTAATAAATCCGTATCAGAAAAATTACATGCTTAGCCGGTAACTGAACCAtacacatgtttttattgtattaaaaacaaggCGAGAGCAAATAGTGGGAGATATAAAATACTGAGTTTTGAGTGAAATATTTCACTCACCATTTCCAACCAGGGAAGCGATGGCTTCAGCTTCAGGCCACGGGGAAGTCTTGAAAAACCTATCAGTCAGTTTGTTCCAGCTGGAGCTGTTCTCATAGACATCCTGAATCTCATAGATTTTCTGTTCAATGTTGTCACTGGACACTCGGTTGGCTTGCAACTCATACACCTTCTGATCAATGAGGTCAGAAATTGTCTTGTGAAAGTACTGCAGGAAGTTCTTGATCACTTCTGGGATGACATGGTACGTCTGCTGCTCATACTGGCGTTCATAGGCCAGGTCTGCTTTAGGGTCAC

Function

symbol description
eif3l Enables RNA binding activity. Contributes to translation initiation factor activity. Involved in translational initiation and viral translational termination-reinitiation. Located in membrane. Part of eukaryotic translation initiation factor 3 complex.

NR:

description
PREDICTED: eukaryotic translation initiation factor 3 subunit E-interacting protein isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU203244 True 1506 lncRNA 0.39 3 20475928 20478231

Neighbor

gene id symbol gene type direction distance location
AMCG00001949 smoc2 coding downstream 7542 20443377 ~ 20468386 (-)
AMCG00001947 NA coding downstream 64471 20406331 ~ 20411457 (-)
AMCG00001948 NA coding downstream 83602 20363308 ~ 20392326 (-)
AMCG00001943 tarbp1 coding downstream 113477 20347992 ~ 20362451 (-)
AMCG00001933 NA coding downstream 192426 20263404 ~ 20283502 (-)
G161475 NA non-coding downstream 37255 20438468 ~ 20438673 (-)
G161391 NA non-coding downstream 250009 20225657 ~ 20225919 (-)
G161346 LOC107739892 non-coding downstream 382583 20092113 ~ 20093345 (-)
G161302 NA non-coding downstream 1018186 19455124 ~ 19457742 (-)
G161206 NA non-coding downstream 1390952 19084112 ~ 19084976 (-)
G161480 NA non-coding upstream 77 20478308 ~ 20478719 (-)
AMCG00001945 NA other downstream 128423 20340425 ~ 20347505 (-)
G161153 NA other downstream 1625044 18835782 ~ 18850884 (-)
G160925 mta3,LOC105904126,LOC106516625,LOC107749351 other downstream 2565075 17908754 ~ 17910853 (-)
AMCG00001863 LOC105006094,LOC104951035,LOC101160874,LOC106578938 other downstream 2610549 17860139 ~ 17865379 (-)
AMCG00001865 NA other downstream 2665831 17808018 ~ 17810097 (-)

Expression


Co-expression Network