G161480



Basic Information


Item Value
gene id G161480
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 20478308 ~ 20478719 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU203253
CCCCGCTGGTGTAAACCTCCAGCTGTCCGTTAATGTTGCTCTTGTCCACCAGGGAGTGCAGGACGTTGAGCACACTGTGCACGTTCCAGATCTTTGGGTTGTTCCTCAGAAACTCAATCTCCTCCTCGGATTTCTTGGCCGTCTTACAGCGGTACTGACTGAAGGACTGGAACCTGGTAGATGAATTCATCTATGATGTCCCACAGCCACTGGTTAGGAAGCTCCAGAGGGGCAGGCCCATCTGCATCTGTggaatttaatttcagagtcTTAACAAAATCTCCTCGGCTTCAGTAGATCCTTCCTGAGGCTC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU203253 True 313 lncRNA 0.51 2 20478308 20478719

Neighbor


gene id symbol gene type direction distance location
AMCG00001949 smoc2 coding downstream 9922 20443377 ~ 20468386 (-)
AMCG00001947 NA coding downstream 66851 20406331 ~ 20411457 (-)
AMCG00001948 NA coding downstream 85982 20363308 ~ 20392326 (-)
AMCG00001943 tarbp1 coding downstream 115857 20347992 ~ 20362451 (-)
AMCG00001933 NA coding downstream 194806 20263404 ~ 20283502 (-)
G161471 if3ei,eif3l,LOC106576896 non-coding downstream 77 20475928 ~ 20478231 (-)
G161475 NA non-coding downstream 39635 20438468 ~ 20438673 (-)
G161391 NA non-coding downstream 252389 20225657 ~ 20225919 (-)
G161346 LOC107739892 non-coding downstream 384963 20092113 ~ 20093345 (-)
G161302 NA non-coding downstream 1020566 19455124 ~ 19457742 (-)
AMCG00001945 NA other downstream 130803 20340425 ~ 20347505 (-)
G161153 NA other downstream 1627424 18835782 ~ 18850884 (-)
G160925 mta3,LOC105904126,LOC106516625,LOC107749351 other downstream 2567455 17908754 ~ 17910853 (-)
AMCG00001863 LOC105006094,LOC104951035,LOC101160874,LOC106578938 other downstream 2612929 17860139 ~ 17865379 (-)
AMCG00001865 NA other downstream 2668211 17808018 ~ 17810097 (-)

Expression



Co-expression Network