AMCG00001997



Basic Information


Item Value
gene id AMCG00001997
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 25438 ~ 27581 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00001997
ATGAGCGAATGTAACACATGTGAGGACCAGTGCTCTTGCAATTCGTGCAGCGCGGCGGCCCTCAGTGCTGGAGCCCCGCTGTCCGAGGGTCCGCGGCGCTCACACCGGCTTGCGTGCTGTCATGTCAGCCGAGCGCTGGTCGGGATGATTGAATCTTCGGAGGCTGCGAGCAGGCCGTGCCGCGATCCCGACAGTGTGCGCCCGTGTGCTACAGCCCTCACTGGCGAGGAAGCCGCGCTCATCTCTGCAGTCTTCCTCAGGTACCGTGTCTGCGGCTCGGTGCGCCAGGTGAAACTGAAACCCGGCcattag

Function


GO: NA

KEGG:

id description
ko03440 Homologous recombination
ko04110 Cell cycle
ko04111 Cell cycle - yeast
ko04115 p53 signaling pathway

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00001997 True 312 mRNA 0.64 2 25438 27581

Neighbor


gene id symbol gene type direction distance location
AMCG00001995 NA coding downstream 1967 29548 ~ 30540 (+)
AMCG00001998 LOC104943579,LOC101075650 coding downstream 29687 57268 ~ 71871 (+)
AMCG00002001 NA coding downstream 227731 255312 ~ 263137 (+)
AMCG00002002 NA coding downstream 240227 267808 ~ 275768 (+)
AMCG00002000 ddx19,LOC108411521,LOC107699345,LOC103386132,LOC107556002,LOC108255077 coding downstream 252626 280207 ~ 289733 (+)
G120193 ube2j2,LOC107599097 non-coding downstream 72538 100119 ~ 103273 (+)
G120201 NA non-coding downstream 94961 122542 ~ 123168 (+)
G120254 NA non-coding downstream 640158 667739 ~ 668057 (+)
G120494 NA non-coding downstream 1846631 1874212 ~ 1876528 (+)
G120516 NA non-coding downstream 1870353 1897934 ~ 1955361 (+)
AMCG00002019 NA other downstream 655089 682670 ~ 992764 (+)
G120518 NA other downstream 1896441 1924022 ~ 1940816 (+)
AMCG00002076 NA other downstream 2824573 2852154 ~ 2854127 (+)
G120742 NA other downstream 2929327 2956908 ~ 2959475 (+)
AMCG00002098 NA other downstream 3506233 3533814 ~ 3542177 (+)

Expression



Co-expression Network