AMCG00002015


Basic Information

Item Value
gene id AMCG00002015
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 672284 ~ 676496 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002015
CCCTGTGGGGCGGTGTGCGTTGCTGCAGTGACGGTCAGTGACAATGGTGTCTGTTACCCCTGCTGTCCAGGATCGTTTGAGGTGAGGATCATCGGAGGCCATGAGGTCACGCCCTACTCGCTGGAGTACCAGGTGTCCATTCAGTTCAAGGAGCGGCACTACTGCGGAGGCACTCTGATCCGGGCGCAGTGGGTGGTTTCCGCAGCGCACTGCTGGAGGCCGAGCTCTGTGATCCAGGTTGTTTTAGCGGAACACGACCTCACTGTCAATGAGGGATACGAGCAGGTGTACAACGTCTCCAACGTGTTCATCTATACCTTCTACAACCCCAAGACCTTCAACGGTGACATCATGCTCATCAAACTCAGTGTCCCAGCGCAGCTCAATGCCCTCGTCCAGCCGGTCGCTCTGCCCGAGTTCCTCAGCTCAATCCCAGCCCAGACCATCTGCACCGTGAGCGGCTGGGGGGTCACCCTGATCTACAGCTACACCCTGTCTCCGGTGCTGCGCGCCGTGGACATCTCAGTGATTGCACAGAATACCTGCTCTTATCAGTACTATGGGAAGATCACGAACAACATGATTTGTGCTGGAAGTCCTGCAGGAGGGAAAGACTCCTGTCAGGGGGACTCTGGGGGACCACTGGTCTGCAATGGGGTTCTGGAAGGCATCGTCTCATGGGGGATAAGTTGCGCCAACCCAATTTACCCTGGCGTTTACACCAAGGTAGCGAACTACGTGAACTGGGTAGAGTGGATCATTAACAACAACTCCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002015 True 777 mRNA 0.56 4 672284 676496

Neighbor

gene id symbol gene type direction distance location
AMCG00002014 NA coding upstream 103232 568090 ~ 569052 (+)
AMCG00002009 NA coding upstream 273798 334436 ~ 398486 (+)
AMCG00002005 cpsf3l coding upstream 355722 298511 ~ 316562 (+)
AMCG00002000 ddx19,LOC108411521,LOC107699345,LOC103386132,LOC107556002,LOC108255077 coding upstream 382551 280207 ~ 289733 (+)
AMCG00002002 NA coding upstream 396516 267808 ~ 275768 (+)
AMCG00002017 NA coding downstream 23925 700421 ~ 705317 (+)
AMCG00002016 agmat coding downstream 31787 708283 ~ 713002 (+)
AMCG00002018 NA coding downstream 53356 729852 ~ 738673 (+)
AMCG00002023 NA coding downstream 143717 820213 ~ 820962 (+)
AMCG00002022 NA coding downstream 176816 853312 ~ 859489 (+)
G120254 NA non-coding upstream 4227 667739 ~ 668057 (+)
G120201 NA non-coding upstream 549116 122542 ~ 123168 (+)
G120193 ube2j2,LOC107599097 non-coding upstream 569011 100119 ~ 103273 (+)
G120494 NA non-coding downstream 1197716 1874212 ~ 1876528 (+)
G120516 NA non-coding downstream 1221438 1897934 ~ 1955361 (+)
G120536 NA non-coding downstream 1319931 1996427 ~ 2005914 (+)
G120563 NA non-coding downstream 1496974 2173470 ~ 2174499 (+)
G120564 NA non-coding downstream 1498091 2174587 ~ 2176442 (+)
AMCG00002019 NA other downstream 6174 682670 ~ 992764 (+)
G120518 NA other downstream 1247526 1924022 ~ 1940816 (+)
AMCG00002076 NA other downstream 2175658 2852154 ~ 2854127 (+)
G120742 NA other downstream 2280412 2956908 ~ 2959475 (+)
AMCG00002098 NA other downstream 2857318 3533814 ~ 3542177 (+)

Expression


Co-expression Network