Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00002034 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 1311197 ~ 1317051 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00002034 | True | 717 | mRNA | 0.57 | 6 | 1311197 | 1317051 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00002033 | epha8,LOC107582396,LOC107654448,LOC107756634 | coding | upstream | 83119 | 1202250 ~ 1228078 (+) |
| AMCG00002032 | epha8,LOC107565732,LOC107654383,LOC107582396 | coding | upstream | 131902 | 1164861 ~ 1179295 (+) |
| AMCG00002027 | NA | coding | upstream | 282632 | 1009222 ~ 1028565 (+) |
| AMCG00002030 | LOC108441403 | coding | upstream | 324814 | 967777 ~ 986383 (+) |
| AMCG00002028 | NA | coding | upstream | 353824 | 952521 ~ 957373 (+) |
| AMCG00002040 | NA | coding | downstream | 69617 | 1386668 ~ 1388576 (+) |
| AMCG00002041 | NA | coding | downstream | 75209 | 1392260 ~ 1410838 (+) |
| AMCG00002038 | cunh1orf50,LOC107654415,LOC107582467,LOC107756638,LOC107751182,LOC105895900 | coding | downstream | 116057 | 1433108 ~ 1438698 (+) |
| AMCG00002039 | cdc42,LOC101067723 | coding | downstream | 147193 | 1464244 ~ 1472376 (+) |
| AMCG00002045 | wnt4,wnt4a,LOC107654388,LOC107565731 | coding | downstream | 386179 | 1703230 ~ 1709587 (+) |
| G120254 | NA | non-coding | upstream | 643140 | 667739 ~ 668057 (+) |
| G120201 | NA | non-coding | upstream | 1188029 | 122542 ~ 123168 (+) |
| G120193 | ube2j2,LOC107599097 | non-coding | upstream | 1207924 | 100119 ~ 103273 (+) |
| G120494 | NA | non-coding | downstream | 557161 | 1874212 ~ 1876528 (+) |
| G120516 | NA | non-coding | downstream | 580883 | 1897934 ~ 1955361 (+) |
| G120536 | NA | non-coding | downstream | 679376 | 1996427 ~ 2005914 (+) |
| G120563 | NA | non-coding | downstream | 856419 | 2173470 ~ 2174499 (+) |
| G120564 | NA | non-coding | downstream | 857536 | 2174587 ~ 2176442 (+) |
| AMCG00002019 | NA | other | upstream | 318433 | 682670 ~ 992764 (+) |
| G120518 | NA | other | downstream | 606971 | 1924022 ~ 1940816 (+) |
| AMCG00002076 | NA | other | downstream | 1535103 | 2852154 ~ 2854127 (+) |
| G120742 | NA | other | downstream | 1639857 | 2956908 ~ 2959475 (+) |
| AMCG00002098 | NA | other | downstream | 2216763 | 3533814 ~ 3542177 (+) |
| AMCG00002152 | NA | other | downstream | 3901779 | 5218830 ~ 5226656 (+) |
