AMCG00002037


Basic Information

Item Value
gene id AMCG00002037
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 1373743 ~ 1377930 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002037
CAATGTCTGAAGGAGTTGCTCTGCCAGCTGGGGATAGAACACCTGTATCCTGGAAAACTGACCCTCAACTCCCTGCTGGAGATCAGTCAGAAGAGTGTAACCGATGTGAAGGTGCAGTCTCTCAGGGATCTGCCGTGGCTCTTCCTGAAAAAGCTACTGATGGTCAATACAGAAGCTAGATGTCTCACACACAACAGTGATGAGGAGAATATGCAGCAAATGCTGGCAGATAACATCTCATCCAAGCTTTATTTGGTTGTGAATTcaaagaaacagacacagcagcAGGATCTGGCCACAATAACAAACATGTCTGCAGAGCTGAAACTGGAACCCAAACAAATtctatttaaaactgaaaaagtaaatgaagCAAAGTTTGCTAATATACTTAgtacaacaattaaaaacattgtccaaaataactgcaagaaaTTTAACTTGCAAGACACAAGGGCTACAGCAGATGAGCTGGGCATCCCAGTTGATGAAGTTCATGACACCACATGCTGCAGCAATGCAGAAATGAGAGCTGAGGAGATTATTAAAGGGATCAGGGTGCACATAGTGACACAGTACAAGGCAAAGCAGCTGCCTCTACAAGGTGAGCTCTGGAAGAAGTTAGCCAAACTTGAGAAGGAAGAGTGTAGACTCAGGGATGCTGGAGACCAGCGTCTGGAGGTGTACAAATCTCAACTACAGCAGGAGAAACAGGACCTCAGAGAAAAACAGAGCAAGTATAAGCTGACCAAAGCGATGCAGCACTTTATCGAGAATGTGTCGAGCCCAGATAGGCTGGAGAGAGCCTTCTATTTAAAGTGGCTCAGGATGAAACTGGATGTGTTGTCTCGCAGACAGCTTTCATCTCTGCGCAACAGATGCAATGAACAACTCAGGAAAACCACACAGGACAGGGAGGCCATTGCACAGCTGGACCAGCAGCTGCTAGACTGCTCACTGGGGATCGAGCATTTCATGAGAGAGATGGGGCAGATCTATGAAGCGTCCCTCTGCAGCTCAGGGAAAGGAACCCCGCAGGTGCTCAAGCTCCCAGCTGTGGCTGCTGACCTGCTGCTGGATGGCTTCCCTCTGGAGCTGGTTGACGGAGATGCATCCAACATCCCAGTGAGGTGGAACGTGGCTGGGGTGTCGGCGAAACACAAGACCATGACGGACAGGAAGCACCTTCTGGAGCAGCTGAATGAGATGACAAAGATTGCGGCTGACATGGAGAAACATTCCACGGTCAATAAGTTCACTGACGTGCTGGACTATGATGCAGATGATGAAAATCCTCATGAGAACAGCAGCATGGAAACATTGTTCATTGATTTGAAATCAGAGGTGTCCTTAGAACTCACATCTGCAGAAAACACAATGATGGATAAACTGAAGGAGTACTACAAGAGAAAGGAAAGGCACATCTCTCTTGTGGAAAAGTATAAAGCTGACTTCATGAACTGTGTCAGAAGTCtgcagacagaggcagagaatACTGTGCTCAACAAGTTGAGGAATGCAATGGAAATTCATAAAGGGATGACAGAGGTGAAAGAAATCCACAGCAAGTACACAAGCCTAATTAAACAGAGAGTGAGGAGCCTACTGGACCACTGCAAGAACAGCAACACCCCCCTGAGTGAAGAGCAGCTCAAGGATGAGTTTGAAAACATGTGGAGGGACACCGTGTCTAATCTGAGCTTTCCTGCTCTGCAACAGAAAGATATTCATGCAGTGGTGCTGCACCAGCTGAGAAACAACTTACAAAGATGTGGCAGTTCAATAAgagaaaaattaaacaatatcaaTGATCTGATTCAATGCGTAGATGAAGAATTTAAAGATGACTTCCAGTACTATGCCTCCTACATTCTAACATACGAGACCTTTGTCAAGGACTGGATATTAAATCAGATTGTAGAACATTTTTCAAGAGATGCTTCTATTGGCGATTTGAGAGTCAGACGTCTGGAGAGCATTGTGGCCAAAGTGGAACAGGCCATAGAGAGAGCAAGGGGTGGCCTGTTAATGGATGGAGACAACAATGCCACTGGTTTTATTAATGAACTGTGCAGAACCCTAAGCAGTGACTTGCCGATCCCCAGGGATGCGGTGGGAGGAACGCTGTTTCAGATCACAGCCAAGAGGGAATCCTTCGCCCAGTCTCTCTCAGAT

Function

GO: NA

KEGG:

id description
ko04614 Renin-angiotensin system
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002037 True 2175 mRNA 0.46 5 1373743 1377930

Neighbor

gene id symbol gene type direction distance location
AMCG00002035 cldn19,LOC106583106 coding downstream 22985 1329547 ~ 1350758 (-)
AMCG00002036 NA coding downstream 47894 1319995 ~ 1325849 (-)
AMCG00002031 NA coding downstream 372157 991964 ~ 1001586 (-)
AMCG00002026 NA coding downstream 455039 910934 ~ 918704 (-)
AMCG00002020 NA coding downstream 643871 717131 ~ 729872 (-)
AMCG00002043 NA coding upstream 42137 1420067 ~ 1430684 (-)
AMCG00002042 NA coding upstream 63249 1441179 ~ 1447756 (-)
AMCG00002049 NA coding upstream 440810 1818740 ~ 1821514 (-)
AMCG00002055 NA coding upstream 632543 2010473 ~ 2012433 (-)
AMCG00002057 NA coding upstream 707499 2085429 ~ 2119334 (-)
G120431 NA non-coding downstream 145584 1225719 ~ 1228159 (-)
G120399 NA non-coding downstream 386519 985403 ~ 987224 (-)
G120334 NA non-coding downstream 683785 686944 ~ 689958 (-)
G120320 NA non-coding downstream 952818 420588 ~ 420925 (-)
G120477 NA non-coding upstream 90009 1467939 ~ 1528085 (-)
G120513 NA non-coding upstream 496283 1874213 ~ 1876061 (-)
G120527 NA non-coding upstream 554323 1932253 ~ 1975025 (-)
G120533 NA non-coding upstream 610439 1988369 ~ 1988627 (-)
G120571 NA non-coding upstream 614677 1992607 ~ 1992897 (-)
AMCG00002044 NA other upstream 108621 1486551 ~ 1490567 (-)
AMCG00002078 NA other upstream 1467452 2845382 ~ 2847937 (-)
AMCG00002085 NA other upstream 1543322 2921252 ~ 2931018 (-)
G120748 NA other upstream 1617578 2995508 ~ 3004917 (-)
AMCG00002094 vamp3,LOC107582408 other upstream 1735512 3113442 ~ 3128440 (-)

Expression


Co-expression Network