AMCG00002049


Basic Information

Item Value
gene id AMCG00002049
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 1818740 ~ 1821514 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002049
ATGTGCGGACTATTGGGGGTTGCGGCGAGTCTGGCAGTGTGCAAGATCATGTTCAATCTCTTCACGTTGCCCAATATCAGCACCCCCTTCAACCCTGTGGCCTGCTGCTGCAAATGCCTGCTGATGTTCACAGACCTCGTCCAGGCAGtgttCCTAGCGTTGCTCCTCCTGGCTGAGCCCGGGATGCTTAATTTAGCATTGCCCAGTGATGTCATCGCCCTGCGCTTCCTGTTGTTCCAGAGCCACGCCTATGGggtggtgctgctgctggcCACACCCCTGATCGCCATAGAGGTGGCTTGCAGGCTGATCCAGCCCCTCCCACTCTATGACAAGCCACACCCAGAAGACACAAAAGTGGGATGTACAGAGTGCAGTGGAGAAATACGTAGCAGGATCATCATGGAGATATTAATGCTATTCCCGGGTTTCCTGTCCTGCCTAATGGTGTGGACCGTGGCTGTGGACATTGCGGACCAGCAGTGGAGGCTGGAGGAGGACCAGCTTTTGATCTGCCTAGACCTGGAGGGTTCACTGTTGCTCTGCCTCCCCAGTCTGCTCACGGTGATCCTGCAACCCCTGGCTGACTCATCCCTGCTGCGACTGGCTCTCGTTTTGTACCTCGTGTTCGCAGCGAGCGTCTACATGATCAGGGCGCGACTCGCAGGCCAGGGGGCAGCACCGACGGACCCCCAGAGcgacagggagagaggagagacaggcGGGTGCATGCAGGCCTTCGCACACCACATCCACCACACAATGGCGCCGCAGCCAGGACACCCCACGGGAGCCATCGCTAACTCGCTAACCCCCGACACGGCACAGTCCGCTGCAATCGAGAGGGCCACTAAAAAAATGCTCACACTTCTCCTAACGCACCCCAGTCCCAACACGACAAAACGGCACTACCAATGCCATTGCTGCTCTACCAAATGCCATTTCGAAAATGACTTTGAGACCGTCATGCAACAGAAGCCCtcgacacacacagacacaccccaCATGAGCACTGTGTATTTAGCCACACCAGACTTGGATGGGCCACAAGCCAACACCCCTGCCCCCAGAGGGAGAGTTTCCCTGCCAGCCGGGGTGCTCAAGGGGCTGCTGTGTGGTATCACTTTATACCTGTTCCCCCCTGGCCTGGCTGTCCACACCTCCCTGATCTGGGGTGTCGAGACTTTGACCACCTGGGGTCTGAGACACATACTGAAAACCCCGAAAGAGCCGAGGGGTCGAGCTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002049 True 1248 mRNA 0.58 2 1818740 1821514

Neighbor

gene id symbol gene type direction distance location
AMCG00002042 NA coding downstream 370984 1441179 ~ 1447756 (-)
AMCG00002043 NA coding downstream 388056 1420067 ~ 1430684 (-)
AMCG00002037 NA coding downstream 440810 1373743 ~ 1377930 (-)
AMCG00002035 cldn19,LOC106583106 coding downstream 467982 1329547 ~ 1350758 (-)
AMCG00002036 NA coding downstream 492891 1319995 ~ 1325849 (-)
AMCG00002055 NA coding upstream 188959 2010473 ~ 2012433 (-)
AMCG00002057 NA coding upstream 263915 2085429 ~ 2119334 (-)
AMCG00002056 efhd2,LOC107683000,LOC107707677,LOC107591793,LOC107550510 coding upstream 299827 2121341 ~ 2127768 (-)
AMCG00002058 NA coding upstream 340030 2161544 ~ 2161834 (-)
AMCG00002061 NA coding upstream 353966 2175480 ~ 2210300 (-)
G120477 NA non-coding downstream 290655 1467939 ~ 1528085 (-)
G120431 NA non-coding downstream 590581 1225719 ~ 1228159 (-)
G120399 NA non-coding downstream 831516 985403 ~ 987224 (-)
G120334 NA non-coding downstream 1128782 686944 ~ 689958 (-)
G120320 NA non-coding downstream 1397815 420588 ~ 420925 (-)
G120513 NA non-coding upstream 52699 1874213 ~ 1876061 (-)
G120527 NA non-coding upstream 110739 1932253 ~ 1975025 (-)
G120533 NA non-coding upstream 166855 1988369 ~ 1988627 (-)
G120571 NA non-coding upstream 171093 1992607 ~ 1992897 (-)
G120572 NA non-coding upstream 171819 1993333 ~ 1993623 (-)
AMCG00002044 NA other downstream 328173 1486551 ~ 1490567 (-)
AMCG00002078 NA other upstream 1023868 2845382 ~ 2847937 (-)
AMCG00002085 NA other upstream 1099738 2921252 ~ 2931018 (-)
G120748 NA other upstream 1173994 2995508 ~ 3004917 (-)
AMCG00002094 vamp3,LOC107582408 other upstream 1291928 3113442 ~ 3128440 (-)
AMCG00002091 LOC103354943,LOC102299287,LOC101482394,LOC108441428 other upstream 1351991 3173505 ~ 3186353 (-)

Expression


Co-expression Network