AMCG00002052


Basic Information

Item Value
gene id AMCG00002052
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 2028613 ~ 2032618 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002052
ATGCTTGTCGTCTTTATGTGCAGCTCTTTAGAAGGGACGAAGCGAAGgtCAAGGAAGGATGTGCAGACTTGTACTCACTGGCAAGCTCCCATTATTTGGGATGGAATGTTTGATGCTCAACAGTATGATGAGTTTTACAAAAGCAGAAATACCGGTGTTGCGCTGACGGTTTTTGCCATTGGCAAgtaCCTGGATGCCTACCTCAAGAATTTCCTCACCTCTGCAGAGAAACATTTCATGCCGGGCTTGCGAGTGGTCTACTACGTCTTCACTGACAGCCCTGAGAGGGTCCCCGAGATCCAGCTGGGGCCACAACGGAGTATCGTTATCATGAAGGTGGAGAAGCACAGACGCTGGCAGGACATCTCCATGATGAGAATGAAGACCATCGCCAACGTCATAGAGTCCCACATCCGCCACCAGGCCCAGTATGTCTTCTGCATGGATGTGGACCAGATCTTCGTGAGCCGATGGGGGTCGGAGGCTCTGGGTGAATCTGTGGCTCAGATGCATGCTTTCTTCTATGACAGATCAAGACTTAGTTTCACCTATGACAGGAATCCCAAGTCTATGGCCTACATGGAGAGAGGCGATCTCTACTACCATGCGGCCATCTTTGGGGGCACGTGGGAGAACGTGCAGCGCCTGGCTGAGAGCTGTTACCTGGGCATCATGACGGACAAGCAGAACCAGGTGGAGGCCCTGTGGCATGACGAGAGCCACCTGAACAAGTACTTCTGGATCATGAAGCCAACCAAAGTGCTGTCCCCTGAGTACTGCTGGTCAGAGGAAATCCAGAACCGTAGCGAAATGCATTTTCCCAGACTCATTTGGGCTGAAAAGCACTACAGTGAACTTAGGGAGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002052 True 867 mRNA 0.51 3 2028613 2032618

Neighbor

gene id symbol gene type direction distance location
AMCG00002053 NA coding upstream 42224 1985760 ~ 1986389 (+)
AMCG00002050 NA coding upstream 124605 1887229 ~ 1904008 (+)
AMCG00002048 znf362,LOC105894282,LOC106582819 coding upstream 155449 1851995 ~ 1873164 (+)
AMCG00002047 trim62,LOC107756651 coding upstream 219332 1802786 ~ 1809281 (+)
AMCG00002046 trim62,LOC102789653 coding upstream 277949 1750215 ~ 1750664 (+)
AMCG00002051 NA coding downstream 22113 2054731 ~ 2076937 (+)
AMCG00002054 NA coding downstream 48615 2081233 ~ 2082288 (+)
AMCG00002059 NA coding downstream 183933 2216551 ~ 2220784 (+)
AMCG00002060 NA coding downstream 215399 2248017 ~ 2251139 (+)
AMCG00002075 NA coding downstream 784139 2816757 ~ 2816972 (+)
G120536 NA non-coding upstream 22699 1996427 ~ 2005914 (+)
G120516 NA non-coding upstream 73252 1897934 ~ 1955361 (+)
G120494 NA non-coding upstream 152085 1874212 ~ 1876528 (+)
G120254 NA non-coding upstream 1360556 667739 ~ 668057 (+)
G120201 NA non-coding upstream 1905445 122542 ~ 123168 (+)
G120563 NA non-coding downstream 140852 2173470 ~ 2174499 (+)
G120564 NA non-coding downstream 141969 2174587 ~ 2176442 (+)
G120565 NA non-coding downstream 152162 2184780 ~ 2184980 (+)
G120566 NA non-coding downstream 169999 2202617 ~ 2203371 (+)
G120602 NA non-coding downstream 193162 2225780 ~ 2225980 (+)
G120518 NA other upstream 87797 1924022 ~ 1940816 (+)
AMCG00002019 NA other upstream 1035849 682670 ~ 992764 (+)
AMCG00002076 NA other downstream 819536 2852154 ~ 2854127 (+)
G120742 NA other downstream 924290 2956908 ~ 2959475 (+)
AMCG00002098 NA other downstream 1501196 3533814 ~ 3542177 (+)
AMCG00002152 NA other downstream 3186212 5218830 ~ 5226656 (+)
AMCG00002190 acot7 other downstream 4554036 6586654 ~ 6602608 (+)

Expression


Co-expression Network