AMCG00002054


Basic Information

Item Value
gene id AMCG00002054
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 2081233 ~ 2082288 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002054
ATGAGGCCGATACCCATCTGTTCTCTGGTGCTGCTCCTCCTCTGTGCCCACCTGCAGGCCTGCCCCACCGCCTGCCGCTGCACGAACCCTGCCAGCATCCTGACCATGGACTGCAGTGACGGAGGCCTGCTTACTCTTCCTCAGGGCATCCCCAGAGACGTGGAGGTCCTGATCCTCAAGAGCAACTTGCTGGATCACCTGCCTAAGTCTGCCTTTCAAAACTTCACCAAGCTGCAGGCTCTCCATCTGCAGAAGAACAAGCTGGAGAGCATCGAGGAAGACCTGTTCGCTCCTCTGTCTGAACTGACCTCCCTCTACCTCTATAGCAACCACCTGGCCCACCTCCCGGATGGTATCTTCCAGCCACTGCACAAGCTGGAACGCCTCTTTTTGAGTTCGAACAAGCTCTCGAGCTTCTCGGACGCGCTCTTTTCCCCGCTGCCGCGGCTCAAGACCCTGAACCTCGCTCACAACAAACTCGAGAGCCTCTCTCCCGACTCCTTCCTGCACCTGCAGAGCCTCACTGTCCTGTCTCTGTCCTCAAACAGCCTCCTGTCCCTGCCGCCCGGGCTCTTCCGTGGCCTGGTTTCCCTCAGTGTGTGCGCGCTCTACGACAACCAGCTGACCCACATCCCTGACGTCTTGTTCCAAGGCCTCCACAACCTCTCCTGGCTCACGCTGGCCAACAACTCTCTCCAGCAGCTACCCCAGGGACTGCTCCGGCAGCCCGGCCTGCAGCACCTGTACCTCTACAACAACAAGCTGCGCACCATCAAAACTGAGGGCATGGAAGATCCCACCCAGCTTAAAACTGTCGACCTGCGGGGGAACCAGCTGGAAACGCTGCCTGCAGGGACCTTCAAAAACTCGCCGGATTTGAAGACCATACGGCTCCAAGGAAACCCATGGAGATGCGACTGCAACATCAGGTACCTGCAGCGATGGCTGACCCGCAATAGAGAACTGATAAAGGACAGGCCGCTCTGTGAGACCCCCCCAGCAGTCCACGGGCAGCCCCTGACCGACATCCCCGAGGCGTATTTCTCCCACTGCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002054 True 1056 mRNA 0.59 1 2081233 2082288

Neighbor

gene id symbol gene type direction distance location
AMCG00002051 NA coding upstream 4296 2054731 ~ 2076937 (+)
AMCG00002052 NA coding upstream 48615 2028613 ~ 2032618 (+)
AMCG00002053 NA coding upstream 94844 1985760 ~ 1986389 (+)
AMCG00002050 NA coding upstream 177225 1887229 ~ 1904008 (+)
AMCG00002048 znf362,LOC105894282,LOC106582819 coding upstream 208069 1851995 ~ 1873164 (+)
AMCG00002059 NA coding downstream 134263 2216551 ~ 2220784 (+)
AMCG00002060 NA coding downstream 165729 2248017 ~ 2251139 (+)
AMCG00002075 NA coding downstream 734469 2816757 ~ 2816972 (+)
AMCG00002074 rimkla,LOC106567384 coding downstream 749396 2831684 ~ 2841963 (+)
AMCG00002073 ppcs coding downstream 775379 2857667 ~ 2861786 (+)
G120536 NA non-coding upstream 75319 1996427 ~ 2005914 (+)
G120516 NA non-coding upstream 125872 1897934 ~ 1955361 (+)
G120494 NA non-coding upstream 204705 1874212 ~ 1876528 (+)
G120254 NA non-coding upstream 1413176 667739 ~ 668057 (+)
G120201 NA non-coding upstream 1958065 122542 ~ 123168 (+)
G120563 NA non-coding downstream 91182 2173470 ~ 2174499 (+)
G120564 NA non-coding downstream 92299 2174587 ~ 2176442 (+)
G120565 NA non-coding downstream 102492 2184780 ~ 2184980 (+)
G120566 NA non-coding downstream 120329 2202617 ~ 2203371 (+)
G120602 NA non-coding downstream 143492 2225780 ~ 2225980 (+)
G120518 NA other upstream 140417 1924022 ~ 1940816 (+)
AMCG00002019 NA other upstream 1088469 682670 ~ 992764 (+)
AMCG00002076 NA other downstream 769866 2852154 ~ 2854127 (+)
G120742 NA other downstream 874620 2956908 ~ 2959475 (+)
AMCG00002098 NA other downstream 1451526 3533814 ~ 3542177 (+)
AMCG00002152 NA other downstream 3136542 5218830 ~ 5226656 (+)
AMCG00002190 acot7 other downstream 4504366 6586654 ~ 6602608 (+)

Expression


Co-expression Network