AMCG00002064


Basic Information

Item Value
gene id AMCG00002064
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 2282905 ~ 2295720 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002064
ATGTTCTGGTTTCTCCCCCTCGCTGAGCGCAGACTGGTCAAAGCTGTTGTGCTTCTCAATTCCTCTGATccctaccccccccccaccaacaccctgctccctccttcctcttccCCCTCCCTGACCAATCCAGACTCGGACAGCCTCTCGAGCCCCACCCGCCTCAGCCTGTCGGACGGCGAGGAGCAGCTGGACCGCCTCCAGCAGGTGGAGCTGGCCCGGACCACGCCCATGTCCCGGTGGAGGGCGGGGACGGTGCAGGCCTGGCTGGAGGTCATCATGGCACTGCCCATGTACATCAGAGCCTGCGCCGACAACGTCAAGAGCGGGAAGGTGCTGCTGAGCCTGACGGATGAGGACTTGGAGCTGGGTCTGGGGGTGAGCAGCTCTATGCACCGCAGGAAGCTCCGCCTGGCCATCGAGGACTACCGGGACGCCGAGGGAGGCCGAGGGCTCTCCAAGGCGGCGGAGATGGACCACCATTGGGTGGCCAAGGCGTGGCTGAGCGACGTGGGTCTGCCCCAGTACTCCCAGGCCTTCCACGCCCACCTGGTGGACGGGCGCATGCTGAACTCCCTGACCCGCCGTGACTTGGAGAAGTACCTCGGCGTCACCAAGAAGTTCCACCAGGTCAGCCTGCTGCTGGCCATTGAGCTCCTGCACACGCTCAGCTTCGACAAGGAGGCTCTGCAGGCCCGGCGGGCCCACTGTGAACACCAGAACACTGACCCAGTGGTGTGGACCAGCCAGCGAGTGATGAAGTGGGAGTACGCCGACAGTCTGCAGAACAGCGGGGTCCACGGCGCCGTGCTGGTGATGGAGCCTGCTTTCAACACGGACGCCATGGCCACGGCACTGGGTATCCCCAGCAACAAGCACATCCTCCGCCGGCACCTCAGTGAGGAGATGAAGGCCGTCGTCAACTCTGCCAGGTTGGGTCTGCAGCAGGATTTTGAGAGGCTGGGCACCCCCACCATCGTGCGGCAGGGCACCCTGGGTCGGCCCTGCGGCTCCGTGAGCCGGCAGACGGAGGAGGATCACTCCCTGAAGAGGCGTGCGTGCAAGCCTCCCCTGGGATTCAACCCCAAAGCCTACAGTGGGAGGGACCTGGGTCTTCACGGCAGCTGCGGCTCCCTCCCCCGAGAGGGACGCGACGAGTCGGGGGGCCGCGTGGAGGGGAGCCCCGCGCACAGCTATTCGGGCATAGAGGTCACCAACGTTTAACCGCGTCGCCGGATCTGTGCCGTGTCCGCTGCGCCCGCGACGGAGAAGGCTGGGAACTCAAGTCCTTATGATGGGCCGGGTGTCTCCGGGTTTGCTGCGCACCGGCTGAGGAGACCCTCTCGAATGTCTTTTCAGAAAACTCCCTCTGGATCCGTCCAGGATCAGATCTCCCTCCCACTGGTCTGGTGTGAGGATCGCTCTGGAGTCTGGAGAGTCTTTTACGCTTGTGTGCAACGCAGCCGTCTTTTCTATGCTCCCTCCCGGACCATCGCACAGGAGCGGCCTTCCACAGAGCCGTTTTATTCAGGAAGCTGTTTTCGCTCATTTCTCTGACCTctgactttgtttttatttattttccttcattacAGGGGATAAGCATTTGAACCAATAACAAGACAAACTTGAGTGGCATAAACATCGAAAAGGTGCTGTTCAAACGCTGAAGAGACGTGGTTTAGAGAGCGTCCACATCCTCTGTAGTTCGTAGCAAAGACAGTATTGTTttacctttttccttttttcttccagtCTTGCTTCAGATTGTGTGACAAGACGCATGTGACGGTGTGCTGAACACACGAAGAGCCTGGCAGTGCTCTACGCTGCCCATTAAACACGGCAAAGGACATTGCTTGAAATGTTTAACCTCACCGCAGTCTTAGACGAGTTTAACAGCTAGggatctttttgtttttgttgtcagcATTGGATCTGAAATAAAGCTAATGATGTAGGTTttcatagaaagaaaaataaatcaatctctTCCCTTTCAGTTTGTTATATCACACGCCATAATACTTAACAATAGAATCTAAAACAACGCAGGAGATTCTATAGATTTTATATAGACACCTCCAGAGTCCGTTCAGAACCGAATTTTATAACCCGGACTTTATCACTCGGTGAATTGACAGTGTGCGGGGGGGTGTGGGTGTTCAGCAAATGCATTTGTTCCTGCTATTTGTAAAAGTTCACCAGCTTGCCATGACTGAATCCCATTGAACTGTGTCTATGAAGCCAATGCAGATTGGCCGCCTCTTTCCAGGCCTGTGTGACATCCTAACGCACTGCGAGAGTGAGATCAGACGCTTCTTGTCCGAGTGTTTTTGCAGCCCCACTTCTGCTCCCTCTATTTATGTTGTTGCTAACCTCCTGACTGCGTCCCGTCTCCCGTCTCCCGTCTCCCGTCTCCTGACCCAGCTTTACACTGTGTGCCTGATTCTctgcagcttttgtttttctttctgtgctttttcaTCCATGCTAACTAATTCCCCCCCAGACATCTCATACACTGACCTGAACCCTCACGGCAAAGTATTAGCATGCTCAGTTAAGCACCATGACCAGTTTCCCTCCGTTGGGAGTCCCAACAGCATCGGCCTCCAGCGCTGGTCCCAGAGAGCCCCAGTCTGACAGGCTTCATCAAGGCTCTTCAGTGATTGGTTCAATTCTGTAAGTGAGAGCTTTACTGGAAGGGAAAGTGAAAGACcctgtagctctccaggaccagcgCTAGAGACCCCGGCCAGTGTAGCTGTAACAGTAACGGGCTCTGCTCAGCAGTGCCGGTTAGGCCCAAGAGTCAAGCCATCACTGCGTCCGCTGGGTTTCAGCACCGGCCAGATGTCCACAGCAGAATTGTCGGAGCCGTTGGTTGGATTCTACGACATCCTGGGTTTCCTTGCCTGGAGAAGTGCCTCCCCCCTCAGTCCTGTttaacacatgcacactcaGTTACACATCGCTTGCTATTTGCTTAGCCTTGGGCCACATCGGGAATggctttttaaatggtttaactAGGCCTACGATTGGACCGATGGCCGTCGCATTGTGATGATTGTGGCTCAGCAGGTGAGCGCAGCGTGTTGACTGAATCAGTCTTGCTTTTGttgcttatttattgattaagtTCAGTCCCGTAAATGGAGCTCCTCAActatattgtgatttttttatgttttgctttacagTAGCAGCTCAAACATGTTCAAGCCAGGCCAGACAGGTCATGTGACCATTGTTGGAGAACACCACCCTGCACCACCCTGATGCTAGAGCGACTTTATCTTTCGTTTCACCGCGGCTGTCTGTGGTCAGAGGCAAAACCGCTTCATCTACAGTAATTGCAGCAATAATTGGTTCAGATCCCTCAGAGctacaatgaaatgaaaatcaagATCATCTTGTTTGAGCCCCCCGGTCTAGATTAGCTTGATCATCACGAGAGAATATTTTGAACTCAAGGCCACATGTAACTCCTATTAATAAtgtgaaggaaaataatttgaattcagGCTGTTATTAAAACCTTGTGTAGACGGGTCTGTCGCCAACCCTCTGGCCTTCAGGGTCACCAGGTCAGCATTTCCTGTGCGCTTTGCTGTGCAAATCAATACCAGACTTTCTGTATGTGCAGAATCAGATTCCTGAGCATGAGGGGGGGATATAGCTGAAATGAGAGACGGGGCTGAAATTCTCCAGGACCTGGAAACTCTGTCTGCGCTGTTGTTGGCTGAAGAGGAGCAGCATTGCTCTGTACGGGCCTCGGTCAGAACGGACCGCCCAGGATTGTTACAGAGGAGCTCGAGTGTGTGAAGCATGCAAGTGAATTTGTCATGCCCCCCCCCAAATGTTTGTACAAAGTAATCATTTTAGAGATGACATTTAGTTCTCAGTTCCACTAGTTGCTGTTCAACCTGATTTAGGTCAAAAAAGTGGATCTCTCTTAAGTTCTTCGATGTTCTTCTCCGGTGTGtgtttgcagtaaaataaagtGCCCATACGGCACGCTTAACAGCCACCCAAACAGAAATCAGTTCCAAACTCTTGAGCAAAACAGTCTTGGCGCACAGAGAGACAACAGTGTCAGGTTTCTGCCTGCTCTGTGCCCAGATGACTTCACCCATGCTGTTGTGTCTGACTGTCTGAGTGGGATGCTGGGATTGATTAGCTACTGGCACCTAAGGAATGAGACGTGCGGCACAGGCTTTCTCTTGTTTCCCTTATATCGTTTCTGTTTTCAGACGATGACCACGCTCTGTGGGCGATGGCAGAGAGCAAAGCACTGTGTGACGACAGAGTAGAAACAGAGAGGAGGACTGGGGGCAAGGATGGCCCTTCTTTCCACACAAAGGCATCAAACGTTCTGGCAAACTATGTAGTCAGTGCCGTCTCTTTAGGATCCTTGGGGAAACGGCTGGATTAACGTCTCTGATGACTGATCTGCTAGCAGCTGGACAAGCCAAATGGAATGATAGTTCGTCCACTTTTATCTTCTCTCAGACGCATTTTCTATTTGTGGAGAGGGGATATAGATGCTCGCTGTGGTTGGTGTGTCTGAACAGCAAGGTCGGTGTGAATTGTAATCCCTGCAGTCCCCGATTCCTAAAGCATGGTCTGTGGTCCTGACGCATGCACAACCTCTGCTTACTTCCCATCGTGGCCGTGCCGTAATCTGTTCCCACTGTCTGCCCCCGGCCTCTGGGAAACGTGCACATGCCTGGCATTTTTCACAGCACATGGACAGCTAAAGATATCACGTCCTTCTTTCTTTTACCCCAGTCCCAGGAGATTAGATCTGGTGGAGTGTATTGCTGGTCAGCAGACtagatagatttatttatttatttatgtttcttatacCTAACTACAAGCCGGCAGAGGCAATGCCGGGTAACGAGGATATGgatggaaaatatttgtatcgtttgtgtaaactgtaagccaccctggataagggcgtctgccaaatAATAGATAGTAACTCAGCCTATCAGGAGACTCCTGAATCAAGGATGCTTGCTTGCCAGCTGTGAAAACCAAGACTGTCGTTTGTGGTTGCTGTCACTGGTCATGTACAGAGTGGTGAGATTCAAACGCCAGTCTTCAGGACTTCAAGATGTGGAGGTGAATCCAGGGTTTTTCTCTGGGGGGTACAGGTGTAGTTTTGTCATTCCTGGTGCATATAGATGCTCAGTCAGGATGCTGTTTTACACATAGACAGGTATTTGCATATTACCTTGTTGAGGGCAGGATGATTCTCAGATATGATGTTAATAATGGTTGGGTTATGCATTAGGGGCTTGCATTGTGTGCCACTTAAAGAAAGCATCCAAAGGTGGTCTGCTGCCCTGTCTTGACAGGAAATCCCCATTTGTCAACCAAATGAACACGcttctgtttttcacatgaCTGATCAAATCACACTGCAACACCCGCCTCCTCCACACGTCTGATAAGTGATTTCAACAGGTGGGTCTGTTGTCTCAAGATAACCCCCAGAGAAATGACGACAGAGTTACACAAGGAGTGCCCTATAAGAATCGGCACAGAACGGAGCCCTGCTGTGTCCCTCAACTTTGACTCAACATAGCTGAGACACAACAACAAGCACTGCACCGAGCAGACGCACACCTCAGAACCTGGTATCTTGGCCACGTGACCCTCATTTTAATGTGGCGCACCTGGGTAATAGTTAGGAAAGAGTAGGGAAAATCGTCCATAATCACTGGTAAATGTTTCAGGTTGATTCACAAGCAATCTCCAGGGGGGGACTGCACACATCTGCAGCATCACTTGTGGCAAATTAAGAACAGACTCCTAAATGTGTTGCGCTATATTCATAATGGCCGTGTTTATTCCAGCGATGCAGTCAGTAAGGCCTCGAGGGTCTACAGTGGTGCACAATGTCACCGGTTTCTCAGCTCATATGCTAACTAACCCATGTTGCAAAACAGAATGAAAGGTCTGGGCTCTGCTTGGCACCTAAGCAGTCACTGGGGCAGACCGCAATGAACAGCCCATTTGTGCAAGTTTGTGTATCATCATCCCTTACCTCTGTGTTGCCAACTAACACAAACGAGCTCTTTGTTGTCACATTTTGAACCAGGTTTAGGAATGAAATGTAACCCATTTGTGGCTACAATCTCATACTGACTGTGCCCTCGCTGTACTTATGTGCCATCCGGGCCTCTCCGCCCTGCTGGGTCAGATTTACCCAAGCACAAACATGTCTCAAAGACGTGACACCTCAAAAATCCCTCTGTCTGTGTAACAGCCAGATTGCATTACTGCATTTGATGCCGAGGGTCTTTCAAAAGATCAGGCGGCGCATATTGAAGAAAGCTGAAGAACCAGCGTCTGCCCATCCCATATGTGTGCTGCTTGGCATAAAATGTCTGGGAGACCCATTGTCATCAAAAGACTGACACACGGAGGGCTTCAAACAGAGGGACATAAACATCTGGACTCCTGGGAGACCTGCTGATGAACAGGAAAGAGAGAAGCCCAGAAGCagattctgaaatgaaatgtcATGACGGGCTCTGGCTACTGGCAAACATCATAAACCAAATAATCCAAAACTTTTTTACGACTTAAAGATTTCCTATAGTCCCTAAACTGGCTCGTAGACTAGGGAAGTAAAATGTGTCCATTTGGCAAACATCATCTCCCTCAACTaagtgattgttgttgtttttttaagcagtgAGGAAGTTCAAGTGTCTGCTTACATAAAGACCCCAGTTCAAACTGTTTGGCTTGGCGCTGACTGGCAGCCCGTGGTCCGGGGCGAGCCATCGACCTCTCTGTGTGCTGGGAGATTAGAGGCTCATTGAGAGTCTGCTGCAAATAACCCTCTGCCcccagcacacacacgcacacgcacacacacgcacacacgcacacgcgcgcacacacacacacacacacacgcacacgcacacacgcacgcgcacacacacacacacacaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002064 True 6991 mRNA 0.51 7 2282905 2295720

Neighbor

gene id symbol gene type direction distance location
AMCG00002062 NA coding downstream 17369 2257811 ~ 2265536 (-)
AMCG00002063 NA coding downstream 39588 2240408 ~ 2243317 (-)
AMCG00002061 NA coding downstream 72605 2175480 ~ 2210300 (-)
AMCG00002058 NA coding downstream 121071 2161544 ~ 2161834 (-)
AMCG00002056 efhd2,LOC107683000,LOC107707677,LOC107591793,LOC107550510 coding downstream 155137 2121341 ~ 2127768 (-)
AMCG00002065 kazn coding upstream 15074 2310794 ~ 2319970 (-)
AMCG00002066 NA coding upstream 172535 2468255 ~ 2468604 (-)
AMCG00002067 NA coding upstream 227030 2522750 ~ 2532760 (-)
AMCG00002068 NA coding upstream 339549 2635269 ~ 2645414 (-)
AMCG00002070 NA coding upstream 358098 2653818 ~ 2662801 (-)
G120601 NA non-coding downstream 58500 2223343 ~ 2224405 (-)
G120589 NA non-coding downstream 120049 2162641 ~ 2162856 (-)
G120574 NA non-coding downstream 286838 1995768 ~ 1996067 (-)
G120573 NA non-coding downstream 288882 1993728 ~ 1994023 (-)
G120572 NA non-coding downstream 289282 1993333 ~ 1993623 (-)
G120683 NA non-coding upstream 399861 2695581 ~ 2696387 (-)
G120743 NA non-coding upstream 657553 2953273 ~ 2953482 (-)
G120746 NA non-coding upstream 689853 2985573 ~ 2986779 (-)
G120754 NA non-coding upstream 713181 3008901 ~ 3020156 (-)
G120760 NA non-coding upstream 744828 3040548 ~ 3042500 (-)
AMCG00002044 NA other downstream 792338 1486551 ~ 1490567 (-)
AMCG00002078 NA other upstream 549662 2845382 ~ 2847937 (-)
AMCG00002085 NA other upstream 625532 2921252 ~ 2931018 (-)
G120748 NA other upstream 699788 2995508 ~ 3004917 (-)
AMCG00002094 vamp3,LOC107582408 other upstream 817722 3113442 ~ 3128440 (-)
AMCG00002091 LOC103354943,LOC102299287,LOC101482394,LOC108441428 other upstream 877785 3173505 ~ 3186353 (-)

Expression


Co-expression Network