AMCG00002102


Basic Information

Item Value
gene id AMCG00002102
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 3503046 ~ 3510980 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002102
ATGAATATTAGCGTGGAGCGGCCGGTGTCTGCTGCTGACGTCACGGATTGGGTCACTCCGCGCTGGGTGGGTTCAGAGCAGCCCAGTCGAGCTGCTTCAGGGCCGGAGGAGAGAGCCGTCATCTCCCAGGACAGCGCGCAACTTCGGGGGGACGTTTCGCTTCATTCCTCCCTCCGTAACTTGCAATGCCCGGCGATACTGCTGGGGCATCCTCCAGAGGCGAACTCTGACCGGTGTCTGCCGCCGGTCCCGACACTCCCGACTcggaaaAGGTTAACCAGCCCTGCCTTCTTTATTTCCCGGCGAGCCCATACGCCGTGCCCGGGACTTCAGCACCGCGACCCCTCTGTGTGCGATGGAGCTCGTTTAACTCCCCCTGAAACGGGCTCAGAAAGCATCGCCCTGCCTGCTGCCGGGAGCACCCAGCCCAGGGACAGAGCTCCGGCTAAGTGCCGCTGCCTGGTTTTTCTGGACCGGTCCAACACCCATTTTTCTCTCCTGTGGCACCGGTTCCCTCCGCTCGCCCGTCCCCGCGTCGCGATGGACACATCCTCCTCCTGCACGCTGGACTCCGAGGACTACAGTCCCAGTTACAAGAGGCGCCGGACGGTGGAGGATTTTAACAAGTTCTGCACCTTTGTGTTGGCCTACGCAGGTTATATTCCATACCCTAAGGAGGAGACTCCACTGAGGACGAGCTCCAGCCCCCCCAACAGCACGGGCAGCACGGTGGACAGCGATGGCTGGGAGCCGCCACGCTTCGGCAGCGACCTGCACCCTGGCGGCAGCCTCTCCGTGACCCCCAAGAACCGGAGGAGCTTCGGGAGCTTCAAGCGGGCCGAGAAGGCGTCCGACCCTCTGGCGCCCCTGATGAAGCGCTCCAAGTCGGCGGGCTTCCTGCTGGATGGGAAGAAGACGGACaaggtgaagaagaagaagaaaaagctgaAGATGAGGGAGTCGGGGGAGCGGCCGGCAGCTCCCGCGGTGACGGTGAAGGCCGAACCGGAGCTGCCTGCAACGGACCGACCGATCAAACAGGAGCCGGCGGATGACTTCAGCATCTCCTCGGAGGCGGTGGACGGCACGGAGACGGGGAGAGACCCCGAGCCTGCCTCTCCCGGGATCTACTCCCCCGCCGACGGTGCCGCCGGCCGGCCCGACTGGGAGGTCCGCTTCAAAGAGGAGCCGCAGCCCGACAGCCCCAGCTCGGACTCCTCCGCCTACGAGGGGCTTGAGGACGCAGAAGGGGAGCAGGATGACACGGAGGCGCCAAGACGGGAGGCAGTTCCCGGGAAGAGGACGGTGATCCGACAGGGGAAGCAGCCCTTCGCCGGGAGACCCATGATCGAGTGCAACGAGTGCAACACCTGGATCCACCTGTCCTGCGCCAAGATCCGCAAGTCCAACGTCCCCGAGGTCTACGTCTGCCAGAGGTGCAGGGACTCCAAATTCGACATCCGCCGCTCCAACCGGTCGCGCATGGGCTCCCGGAAACTCTTCCTGGACTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002102 True 1512 mRNA 0.64 7 3503046 3510980

Neighbor

gene id symbol gene type direction distance location
AMCG00002104 NA coding downstream 4240 3496159 ~ 3498806 (-)
AMCG00002096 NA coding downstream 228128 3274423 ~ 3274918 (-)
AMCG00002095 NA coding downstream 355999 3146604 ~ 3147047 (-)
AMCG00002093 LOC106567259 coding downstream 356566 3134108 ~ 3146480 (-)
AMCG00002092 NA coding downstream 392138 3095720 ~ 3110908 (-)
AMCG00002103 NA coding upstream 16372 3527352 ~ 3533819 (-)
AMCG00002108 NA coding upstream 130202 3641182 ~ 3661770 (-)
AMCG00002113 NA coding upstream 257175 3768155 ~ 3777213 (-)
AMCG00002116 NA coding upstream 278078 3789058 ~ 3794546 (-)
AMCG00002118 NA coding upstream 306842 3817822 ~ 3824170 (-)
G120842 NA non-coding downstream 118 3500281 ~ 3502928 (-)
G120841 NA non-coding downstream 8996 3492956 ~ 3494050 (-)
G120789 NA non-coding downstream 410147 3091776 ~ 3092899 (-)
G120760 NA non-coding downstream 460546 3040548 ~ 3042500 (-)
G120754 NA non-coding downstream 482890 3008901 ~ 3020156 (-)
G120849 NA non-coding upstream 24842 3535822 ~ 3536525 (-)
G120853 NA non-coding upstream 27782 3538762 ~ 3540826 (-)
G120914 NA non-coding upstream 189512 3700492 ~ 3704364 (-)
G120975 NA non-coding upstream 576128 4087108 ~ 4087418 (-)
G121039 NA non-coding upstream 1056459 4567439 ~ 4569294 (-)
AMCG00002097 NA other downstream 36585 3407485 ~ 3466461 (-)
AMCG00002091 LOC103354943,LOC102299287,LOC101482394,LOC108441428 other downstream 316693 3173505 ~ 3186353 (-)
AMCG00002094 vamp3,LOC107582408 other downstream 374606 3113442 ~ 3128440 (-)
G120748 NA other downstream 498129 2995508 ~ 3004917 (-)
AMCG00002085 NA other downstream 572028 2921252 ~ 2931018 (-)
G120907 NA other upstream 202887 3713867 ~ 3716252 (-)
G120927 slc45a1,LOC107756616,LOC106565711,LOC107702000 other upstream 273256 3784236 ~ 3786544 (-)
G120993 NA other upstream 703735 4214715 ~ 4219877 (-)
AMCG00002167 NA other upstream 2464745 5975725 ~ 6015393 (-)
AMCG00002223 NA other upstream 4315661 7826641 ~ 7839411 (-)

Expression


Co-expression Network