Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00002104 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 3496159 ~ 3498806 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| K23203 | THAP1_3; THAP domain-containing protein 1/3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00002104 | True | 1113 | mRNA | 0.68 | 5 | 3496159 | 3498806 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00002096 | NA | coding | downstream | 221241 | 3274423 ~ 3274918 (-) |
| AMCG00002095 | NA | coding | downstream | 349112 | 3146604 ~ 3147047 (-) |
| AMCG00002093 | LOC106567259 | coding | downstream | 349679 | 3134108 ~ 3146480 (-) |
| AMCG00002092 | NA | coding | downstream | 385251 | 3095720 ~ 3110908 (-) |
| AMCG00002090 | NA | coding | downstream | 406275 | 3087544 ~ 3089884 (-) |
| AMCG00002102 | NA | coding | upstream | 4240 | 3503046 ~ 3510980 (-) |
| AMCG00002103 | NA | coding | upstream | 28546 | 3527352 ~ 3533819 (-) |
| AMCG00002108 | NA | coding | upstream | 142376 | 3641182 ~ 3661770 (-) |
| AMCG00002113 | NA | coding | upstream | 269349 | 3768155 ~ 3777213 (-) |
| AMCG00002116 | NA | coding | upstream | 290252 | 3789058 ~ 3794546 (-) |
| G120841 | NA | non-coding | downstream | 2109 | 3492956 ~ 3494050 (-) |
| G120789 | NA | non-coding | downstream | 403260 | 3091776 ~ 3092899 (-) |
| G120760 | NA | non-coding | downstream | 453659 | 3040548 ~ 3042500 (-) |
| G120754 | NA | non-coding | downstream | 476003 | 3008901 ~ 3020156 (-) |
| G120746 | NA | non-coding | downstream | 509380 | 2985573 ~ 2986779 (-) |
| G120842 | NA | non-coding | upstream | 1475 | 3500281 ~ 3502928 (-) |
| G120849 | NA | non-coding | upstream | 37016 | 3535822 ~ 3536525 (-) |
| G120853 | NA | non-coding | upstream | 39956 | 3538762 ~ 3540826 (-) |
| G120914 | NA | non-coding | upstream | 201686 | 3700492 ~ 3704364 (-) |
| G120975 | NA | non-coding | upstream | 588302 | 4087108 ~ 4087418 (-) |
| AMCG00002097 | NA | other | downstream | 29698 | 3407485 ~ 3466461 (-) |
| AMCG00002091 | LOC103354943,LOC102299287,LOC101482394,LOC108441428 | other | downstream | 309806 | 3173505 ~ 3186353 (-) |
| AMCG00002094 | vamp3,LOC107582408 | other | downstream | 367719 | 3113442 ~ 3128440 (-) |
| G120748 | NA | other | downstream | 491242 | 2995508 ~ 3004917 (-) |
| AMCG00002085 | NA | other | downstream | 565141 | 2921252 ~ 2931018 (-) |
| G120907 | NA | other | upstream | 215061 | 3713867 ~ 3716252 (-) |
| G120927 | slc45a1,LOC107756616,LOC106565711,LOC107702000 | other | upstream | 285430 | 3784236 ~ 3786544 (-) |
| G120993 | NA | other | upstream | 715909 | 4214715 ~ 4219877 (-) |
| AMCG00002167 | NA | other | upstream | 2476919 | 5975725 ~ 6015393 (-) |
| AMCG00002223 | NA | other | upstream | 4327835 | 7826641 ~ 7839411 (-) |
