AMCG00002106


Basic Information

Item Value
gene id AMCG00002106
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 3606885 ~ 3618192 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002106
ATGGTGTTCAGTGCTATTGACCTGCCTCTGTCATACATGGGTCAGGCTCGCCGGAGGAAGAACATGACTGAGTTTCTCGGGGATGCCAACATCCCGTCTCCCGATTCGCTGTCACAGCTGGGCGGCTCACTGCCCAGTGCGGGCGCCGGGCCGGACAGCTGGAAGAACCGGGCGGCTAGTCGCTTCAGCGGCTTTTTCGGCTCAGGCATGGGGACCGGATCATTCGGCAGGgagCTGGACCGGGCCGAGCAGCTCCAGAACAAGCTTCACTCATACACCGTGTTCGGGCTGCCCAAAGTGCCCTCCCAGCTGGCCTTTCACCACGACTcatgggaggaggaggagacgaACCTGGCCTTGGAAGAGTCCTGGCAGGAGCTGCTAGAAGACCCTCAGTCTCTGACCAGAAAGCAGGTTCACCAGCAGGAAGCCATCTGGGAGCTGCTGCAGACCGAAGCCACCTACATCAAAAAGCTGCGTGTCATCACGGATCTGTTCCTGTGTGGGCTGCTCAACCTGCAGGAGAGCGGCCTGCTGTCGGAGGTCGAGCCCGCGCGCCTCTTCAACAACATCCAGGAGATCGTGCAGCTGCACACGGGGCTGTGGGCCGAGGTGATGCTGCCGGCGCTGGAGAAAGCCCGCGCCGAGAGGACCCTGCTCAACCCCACCCACCTGCACCAGGGCTTCAGCACGTGGGGAGAGACGCACAAGCAGTGTAACCGGCTCAAGCTGACCGACATGCTGGTCAAGCCCCACCAGCGCCTCACCAAGTACCCCCTGCTGCTGAAGAGCGTCCTGAAGAAGACAGACGACCCAGCGGCCCGCGACGCCGTCATCAGCATGGTGGCCTCGGTGGAGAGCTTCATCAACAGTGTGGACTCCCAGATGCGCCAGCGACAGGAGCGGCAGAAGCTGGCGACGGTGACGGGCCGCATCGAGGCCTATGAGGCGGTGGATGGGGGCAGCGAGGAGGTGGAGAAGATCCTGCGGGAGTTCAGCCGGTTTGACCTGACTGCTCCCATGATGGGCATCTCTCCCGACCACACGCGCCAGCTGCACCTGGAGGGGGCGCTGCGTATGAAAGAGGGCAAGGACAGCCGGaTGGACGTGTACTGCTTCCTGTTCACCGACATGCTGCTGATCACCAAGCCAGTGAAGCGCGCCGAGAGGGCCAAGGTGGTCCGCCAGCCCCTGATCCTACACAATGTGGTGTGCCGGGAGCTCAAGGACCCCGGCACCTTCCTCCTCATCTACCTCAACGAGTTCCGCAGCGCTGTGGCGGCCTTCTCCTTCCAGGCCAACAGTGCTGCCCAGGGGCGGAGCTGGATCGAGGCCATCTGCAATGCACAGGTATGccaaTCTGATGGCTCCACAGAGACTCTGTCCGTGGTGGCGATGGAAGAGGCCAGTGAGGAGGCGGGCGGCGCGGGCTCGTCCTCCCCGGAGATGGAGCGAGGGGGACACTTCAGTGGGGAGTCGGCCTCAGTGAGCGAGACCCCCTCACACGGTGCAGCCCCCCGGCGCTCCAGCACCCCAGCCGCCGTCCCCGCCCGACCGGAGGGCAGGAGGGAGCAAGCGGAGAGCGGCGGCCTCAACACGGAGGCGCAGTGCCGCTCCCTGTCCATGGACAGCGCCTACGGCACCCTGTCCCCCGAGTCGCTGCTGAGACAGCTGGACCAGAGGGAGAGGCGATGCCAGAGTGAGGGGGAGGAGACCGAGGGCGAGGAGGCAGAGACTGAAGGGGAGGAGATGGAgcaggaggaggacgaggaagaGGATGACACCACCTCCACTAGCTCCCAGCGCTCCTCTGGCCCCTCCCCCAAGCTGCGGCGCCGCCCCCCAGTGCAGCCCCGCCTCCACTGCCTGCGGAGCTCCACCTACAACGTGGAGAGGCTGCCGGCAGAGCCCTCGGGGTCGCGGAGCCGCTCGGGCAAGCTGACGGACACCTTAAAGAGGGCCGAGGCCCGGCGGGTGCAGAGGACCCTGGTTAATGGGGCCGGCAGGAGCTGCAGTGGGAGCCACAGTGGGAGCCACACGAGCAGCAGCGGCTCGGAGGCCGAGAGCGGTGACGCCTGGCTCGCTCCGGGGGACGAGCACGGCGGCCAGGGCCCCGTCTCCATAGACGCAGGAGTAAGCCGAAAGTCGTCCCCCGACTCCCAGCCCCCTGCCCAGCAGCACAAGAAGCTTACCCTCGCCCAGCTGTACAGGATACGGACCACCCTGGTGCTCAACTCCACACTCACGGCATCCGAGGCGTTGGCTGGCtgtgccacacactgcacaatCCCAGGAGTTAAACTTCCTTCTGCCACTTATAAATCACCTGTCCTGCGATGGCCGGCCCGGTCGGCCGCTCCCATTCTCCGCACGACGGGCCGATGGGGCAGAGCGTGA

Function

GO: NA

KEGG:

id description
K19464 PLEKHG5; pleckstrin homology domain-containing family G member 5

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002106 True 2397 mRNA 0.65 13 3606885 3618192

Neighbor

gene id symbol gene type direction distance location
AMCG00002107 NA coding upstream 11903 3589367 ~ 3594982 (+)
AMCG00002099 NA coding upstream 44618 3561618 ~ 3562267 (+)
AMCG00002101 klhl21 coding upstream 83040 3519315 ~ 3523845 (+)
AMCG00002100 NA coding upstream 117252 3479844 ~ 3489633 (+)
AMCG00002086 NA coding upstream 519592 3085012 ~ 3087293 (+)
AMCG00002105 NA coding downstream 10259 3628451 ~ 3642159 (+)
AMCG00002112 NA coding downstream 90000 3708192 ~ 3710721 (+)
AMCG00002110 NA coding downstream 99805 3717997 ~ 3730830 (+)
AMCG00002111 NA coding downstream 126656 3744848 ~ 3761328 (+)
AMCG00002109 slc45a1 coding downstream 161105 3779297 ~ 3786544 (+)
G120827 NA non-coding upstream 103958 3500337 ~ 3502927 (+)
G120823 NA non-coding upstream 112818 3491280 ~ 3494067 (+)
G120794 NA non-coding upstream 490461 3113450 ~ 3116424 (+)
G120779 NA non-coding upstream 505839 3100278 ~ 3101046 (+)
G120778 NA non-coding upstream 506743 3099607 ~ 3100142 (+)
G120928 NA non-coding downstream 170524 3788716 ~ 3791941 (+)
G120961 NA non-coding downstream 322264 3940456 ~ 3940716 (+)
G120974 NA non-coding downstream 468967 4087159 ~ 4087472 (+)
G121044 NA non-coding downstream 962662 4580854 ~ 4581879 (+)
G121045 NA non-coding downstream 963781 4581973 ~ 4582280 (+)
AMCG00002098 NA other upstream 64708 3533814 ~ 3542177 (+)
G120742 NA other upstream 647410 2956908 ~ 2959475 (+)
AMCG00002076 NA other upstream 752758 2852154 ~ 2854127 (+)
G120518 NA other upstream 1666069 1924022 ~ 1940816 (+)
AMCG00002019 NA other upstream 2614121 682670 ~ 992764 (+)
AMCG00002152 NA other downstream 1600638 5218830 ~ 5226656 (+)
AMCG00002190 acot7 other downstream 2968462 6586654 ~ 6602608 (+)
AMCG00002215 NA other downstream 3775608 7393800 ~ 7411230 (+)
AMCG00002245 NA other downstream 5120579 8738771 ~ 8792478 (+)
AMCG00002272 NA other downstream 6226013 9844205 ~ 9851312 (+)

Expression


Co-expression Network