AMCG00002107


Basic Information

Item Value
gene id AMCG00002107
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 3589367 ~ 3594982 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002107
ATGCAGCTGCAGAAAGTTGAGCTGTTTATCCAAGACAAGCTTATTGACTCCGAGCAGAGCCTGCTTAGTAAGGCAGGGCTCGGCGGCAGGGCTTTGGCCCCTCTCGGTGGCTGCGTCGGGTCCCTGCGGCAGCCTGCCCTGGGTGGGGGCAGCGTGGGCGATGATCTGAGCTCACctGTGTGCCACCACCCCGACTGCCAGGACCTGAACAGCAAGAGCCCGCTCAACCTATGCGAGTCATGTGACTCCCGCTGCCACCAGAACGAGACGGACGCCATGCACTTCGACCGGCACCCCCGTTTCGACCTGCAGCCGCAAGgTTCGATCCTGGCGCGCAACGTGTCCACGCGCTCCTGCCCCCCCCGCACCAGCCCTCCGTCGGacctggaggaggaggatgggggGGGTGATGACAAGGGGGATCACAAAGCGACCGGGATTAAGCTGACGAAGAAGAAGCCGCGACGCCGGCACACAGACGTGAGTTCGGGCCCCTCACACACACCTAGGGCTCTGTGTCGCCCCCTGCAGGACCCGAGCAAGGAGTGCTTCACCCTGAAGTTCGACCTGAATGTGGACATTGACATGGAGATTGTGCCGGCCATGAAGAAGAAGACGCTACGgGAGGTCCTGGGCCCCGTGTTCGAGCGCAAGGGCATCAAGCTTTCCCAGGTGGACCTGTTCCTCGACCAGTCCAACACCCCACTGTCCCTCAACTTCGAGGCCTACCGCTTTGGGGGCCACTACATCAAAGTGAGAGcGAAACCTGGAGACGAGCTGAAGGTAGAACAGGAGGTGAAGGACCTGCGCTCCCTCAGTCTGCCCAACATGAAGCCCTCGCCCGGGCAGTCCCCTTACATCCTCTCCCCTAGCATCGACCGGCTGGAGCACGGCTCTCTGGGTCGTCGGGACACCGTGGATCTGCTGCCACGAGGAATCTACACCGAGTGTCTGCAGTGGGCTCTGCACCGTGCACAGGTGTTGGTGCCTGCTCCTCTTTGTGCTCGGGGTGGTATTTGCCTAGCGGGACTTGCTGTTGGCGTAGAAGTCATCTCCATCTTTCGGCACGTTCTTGTGAccgtttggtttgttttcttccccacAAACACGCAAGAAAACGAAACGGTCAGGCTGTCGCAAGGGCTCTCCGCCGGCATGTCGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002107 True 1164 mRNA 0.61 8 3589367 3594982

Neighbor

gene id symbol gene type direction distance location
AMCG00002099 NA coding upstream 27100 3561618 ~ 3562267 (+)
AMCG00002101 klhl21 coding upstream 65522 3519315 ~ 3523845 (+)
AMCG00002100 NA coding upstream 99734 3479844 ~ 3489633 (+)
AMCG00002086 NA coding upstream 502074 3085012 ~ 3087293 (+)
AMCG00002087 NA coding upstream 549344 3025064 ~ 3040023 (+)
AMCG00002106 NA coding downstream 11903 3606885 ~ 3618192 (+)
AMCG00002105 NA coding downstream 33469 3628451 ~ 3642159 (+)
AMCG00002112 NA coding downstream 113210 3708192 ~ 3710721 (+)
AMCG00002110 NA coding downstream 123015 3717997 ~ 3730830 (+)
AMCG00002111 NA coding downstream 149866 3744848 ~ 3761328 (+)
G120827 NA non-coding upstream 86440 3500337 ~ 3502927 (+)
G120823 NA non-coding upstream 95300 3491280 ~ 3494067 (+)
G120794 NA non-coding upstream 472943 3113450 ~ 3116424 (+)
G120779 NA non-coding upstream 488321 3100278 ~ 3101046 (+)
G120778 NA non-coding upstream 489225 3099607 ~ 3100142 (+)
G120928 NA non-coding downstream 193734 3788716 ~ 3791941 (+)
G120961 NA non-coding downstream 345474 3940456 ~ 3940716 (+)
G120974 NA non-coding downstream 492177 4087159 ~ 4087472 (+)
G121044 NA non-coding downstream 985872 4580854 ~ 4581879 (+)
G121045 NA non-coding downstream 986991 4581973 ~ 4582280 (+)
AMCG00002098 NA other upstream 47190 3533814 ~ 3542177 (+)
G120742 NA other upstream 629892 2956908 ~ 2959475 (+)
AMCG00002076 NA other upstream 735240 2852154 ~ 2854127 (+)
G120518 NA other upstream 1648551 1924022 ~ 1940816 (+)
AMCG00002019 NA other upstream 2596603 682670 ~ 992764 (+)
AMCG00002152 NA other downstream 1623848 5218830 ~ 5226656 (+)
AMCG00002190 acot7 other downstream 2991672 6586654 ~ 6602608 (+)
AMCG00002215 NA other downstream 3798818 7393800 ~ 7411230 (+)
AMCG00002245 NA other downstream 5143789 8738771 ~ 8792478 (+)
AMCG00002272 NA other downstream 6249223 9844205 ~ 9851312 (+)

Expression


Co-expression Network