AMCG00002111


Basic Information

Item Value
gene id AMCG00002111
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 3744848 ~ 3761328 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002111
ATGCTGCAGCAAGTTGCCTTGATGGTCAAAGTGAGCGGCAGAGCCTGCAGGAGCGCAGATCTACCTGTCCTGTCCGGCTCtgctctgtctctcagtctAGTTCACCCCTCGaccacttttctctctctctctctctctctcttcagagtGACAATAATGGGTAAATCGGAAAGCCAGATGGACATCGTGGAGAAATCGCGCAGGGCGGGCAGGCGGCGCTGCAGCGCGGCGGAGATCGGGCTCtcggtgctgctgctgctggcgaGCGGCGCGCTGGCCGGACTGCTGCTGCTCTACACTGCGGCCACAAGAGAGCCCACGTACCGTGCCAGCGTGAATAATGTGTGCACAACGCCAGGCTGCGTCACTGCAGCTGCCAGGCTCATCCAGAACATGGACCCCGGGGCCGAACCGTGCCAGAACTTTTACCAGTATGCCTGCGGGGGCTGGCTGAACCACCACGTCATCCCCGAGACCAGCTCCCGTTACAGCGTCTTTGACATCCTGGGAGACGAGCTGGAGATCATCCTGAAGGGGGTGCTGGAAACAGAGAGTGACCAGGACAGGGAGGCCTTCAGGAAAGCCAAGACTCTGTACCACTCCTGCATGAACGAGAGTCTTATAGAGAAGCGTGACTCGCTGCCACTGATGAAGCTCATCGATGCCATTGGAGGATGGCCCGTGGCCTCCGAGGACTGGAACAGCACCACAGAAGAGCAGTGGAGTCTGGAGGACACCCTGGCCACTCTGAACGCCCGCTTCCACAAGAAGGTGCTGGTGGACCTGTTCGTGTGGACGGATGACCGCGACTCCAGCCGCCACATCATCTACATCGACCAGCCTGGATTGGGAATGCCGTCCCGGGATTACTACTTCAACGACGGGAACTACAAGCGGGTGCGTGACGCCTACCTGCAGTTCATGGTGTCGATCGCACGCATGGCCCGCGAGGACAGGAACCTGACACAAGACGAGGAGCTGGTTCTGGAGGAGCTGACCGGCGTGCTGGAGCTGGAGACCGACATCGCCAGCGCCACCTCGCCGGCAGAGGAGCGGCACGACATCACCCTGCTCTACCACAAGATGTCCCTCAGTGAGGTGCAGGAGCGCTTCCACCTGAACGCCTTTAACTGGACGAAGTTTGTCCAGGGCGTGCTGTCCAGTGTCAGTATCGATGTGCAGGCCCAGGAGGAAGTGGTGGTGTATGGCGCCCCCTACCTACAGAAACTGGGAGACGTCCTCTCCAGACACCCTGTCAGGACTCTGCAGAACTATCTGACCTGGCAGCTCATCATCGACAGGGTCAGCAGCCTGAGCCGTCGCTTCAAAGATGCCAGGGCCCACTACAGGAAGGCACTGGACGGGACGACCGTGGAGGAGGCCCGCTGGCGGGACTGTGTGCGCTACGTCAAGAGCAACATGGAGAATGCGGTGGGCGCCCTGTACGTCCGGGAGACCTTTGCCGGAGAGAGCAAGCGCATGATGAGCGAGCTGATCAGTAAGATCCAGGAAGCGTTTGTGGAGACGCTGGACGAACTGCGCTGGATGGATGATCAATCCAAGGAGAAGGCAAGAGAAAAGGCTCTGGCAATCAAAGAGCAGATCGGCTATCCCGACCACATCCTCGAGGAGCAGAACCACAAGCTGGACCAGGAGTACGCACATCTGAACTTCAGTGAGGAGAACTACTTCGAGAACATCCTGCAGAACCTGCACGCCGGGGCCCAGAAGAGCCTGAGGAAGCTGAGAGAGCGGGTGGACCCAGACCTGTGGATTATCGGAGCCGCTGTGGTCAACGCCTTCTACTCCCCCAACAGAAACCAGATAGTTTTCCCAGCTGGCATCCTGCAGCCTCCCTTCTTCagccagcagcagctccaggccCTGAATTTCGGCGGGATCGGCATGGTGATTGGTCACGAGATCATCCATGGCTTCGATGACAATGGTACCCAAAAACCCACACCCCCCGACACCTCCGCCCCCATCACGTTCTCTCTCATTCACTTCCACGACTCCCTCACTTCACTTCCCTTCTCTGCTGTTCTGTGCTCTATAGCTACAGAGGTAGTCAACAAGCGGGGGCGGGGGTTCAGCTCAGTGTGTGGAGAGACAGGTGCAAAAATCAAATCCTGCTGTGTCTCAAAAACAGGGAGGAATTTCGACAAGGACGGGAACATGTTTGATTGGTGGAGCAACTATTCCGCCATGCACTTCAAGGACCAGTCCCAGTGCATGGTCAACCAGTACGGAAACTTCAGCTGGAAGTTGGCCGGAGGACAAAACGTCAGTGGGATCAGCACGCTGGGAGAAAACATCGCTGACAACGGAGGAGTCCGACAAGCCTATAAGGCCTACCTCAAgtgggtggagagagagggggaggagccACATCTGCCCGGCTTGAACCTCGACCACAAGCAGCTGTTCTTCCTCAATTTCGCACAGGTGTGGTGTGGCTCCTACCGGCCCGAATACGCCAGCCAGTCTATCAAGACGGACTCACACAGCCCCCTGGAGTACAGAGTGATCGGCTCTCTGCAAAATTTCGGGGCGTTCGCGGAGGCCTTCCACTGTACGCGGGGCAGCCCCATGCACCCAGAGGTGAAGTGCCGGGTATGGTAG

Function

GO:

id name namespace
GO:0008237 metallopeptidase activity molecular_function

KEGG:

id description
K08635 MMEL1, NEP; neprilysin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002111 True 2625 mRNA 0.58 22 3744848 3761328

Neighbor

gene id symbol gene type direction distance location
AMCG00002110 NA coding upstream 14018 3717997 ~ 3730830 (+)
AMCG00002112 NA coding upstream 34127 3708192 ~ 3710721 (+)
AMCG00002105 NA coding upstream 102689 3628451 ~ 3642159 (+)
AMCG00002106 NA coding upstream 126656 3606885 ~ 3618192 (+)
AMCG00002107 NA coding upstream 149866 3589367 ~ 3594982 (+)
AMCG00002109 slc45a1 coding downstream 17969 3779297 ~ 3786544 (+)
AMCG00002115 NA coding downstream 35927 3797255 ~ 3815714 (+)
AMCG00002114 NA coding downstream 77035 3838363 ~ 3842411 (+)
AMCG00002119 NA coding downstream 125159 3886487 ~ 3897924 (+)
AMCG00002124 pax7a,pax7,LOC107708260,LOC105907504 coding downstream 222342 3983670 ~ 3987843 (+)
G120827 NA non-coding upstream 241921 3500337 ~ 3502927 (+)
G120823 NA non-coding upstream 250781 3491280 ~ 3494067 (+)
G120794 NA non-coding upstream 628424 3113450 ~ 3116424 (+)
G120779 NA non-coding upstream 643802 3100278 ~ 3101046 (+)
G120778 NA non-coding upstream 644706 3099607 ~ 3100142 (+)
G120928 NA non-coding downstream 27388 3788716 ~ 3791941 (+)
G120961 NA non-coding downstream 179128 3940456 ~ 3940716 (+)
G120974 NA non-coding downstream 325831 4087159 ~ 4087472 (+)
G121044 NA non-coding downstream 819526 4580854 ~ 4581879 (+)
G121045 NA non-coding downstream 820645 4581973 ~ 4582280 (+)
AMCG00002098 NA other upstream 202671 3533814 ~ 3542177 (+)
G120742 NA other upstream 785373 2956908 ~ 2959475 (+)
AMCG00002076 NA other upstream 890721 2852154 ~ 2854127 (+)
G120518 NA other upstream 1804032 1924022 ~ 1940816 (+)
AMCG00002019 NA other upstream 2752084 682670 ~ 992764 (+)
AMCG00002152 NA other downstream 1457502 5218830 ~ 5226656 (+)
AMCG00002190 acot7 other downstream 2825326 6586654 ~ 6602608 (+)
AMCG00002215 NA other downstream 3632472 7393800 ~ 7411230 (+)
AMCG00002245 NA other downstream 4977443 8738771 ~ 8792478 (+)
AMCG00002272 NA other downstream 6082877 9844205 ~ 9851312 (+)

Expression


Co-expression Network