AMCG00002112


Basic Information

Item Value
gene id AMCG00002112
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 3708192 ~ 3710721 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002112
ATGGGTCCCCAGCTGGCCAGACCTCGCCAGAAGGACGCGGGTCACGTGATGTTCCGGTCCCCAGACGAGGAGTACACTCTGAGCGCTGGAGGCCTGTCCCAGCAGCCGCTGATGGGCTACGACTGGATTGCAGGCATGCTGGACACGGACAGCTCCCTGGCCGAGCGCTCGGAGCAGTTCTTCACTGAGATCAAGAGCTTCCGTCAGGTCAACCGTGACGAGTGCGTCCACGAGCCGTACGCGCAAGTGGAAGATCTCAACTTTTCGCCCACGAGAATGTCCAGAAAAGAGCAAGAGCTGGAGTTCGAGCAGGACTCTCACCAATGCACCTACTGCTACAGAGTCAACAGCCGCCTCTTCCCTGTGCCCCTGGACCCCCGGGCAGCGTGCCCTGTGTGCAGGACCCCCCGATCCCAGCGCCCCCACGCCCCCTCAGAGCCCGCCTTCATCAGGTATACCGATCCCCCCCGTCCCGTACCGCTCGCCGCACCTCCTCAAAGCCCTTCCCACAGCACTGGACCCCAAGTGGCGCGACTCGACCGTGTGGCGACCTCTGTTTTGTCGAGCTCCCGTACTCGGTCGGGTGATGTTTCCACCAGGGCCCGTGTCGGGTCAGGACCAGCAGCCGTGGGTTTTCTGGGCTCTGGCAGGACTTCTTATTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002112 True 663 mRNA 0.63 5 3708192 3710721

Neighbor

gene id symbol gene type direction distance location
AMCG00002105 NA coding upstream 66033 3628451 ~ 3642159 (+)
AMCG00002106 NA coding upstream 90000 3606885 ~ 3618192 (+)
AMCG00002107 NA coding upstream 113210 3589367 ~ 3594982 (+)
AMCG00002099 NA coding upstream 145925 3561618 ~ 3562267 (+)
AMCG00002101 klhl21 coding upstream 184347 3519315 ~ 3523845 (+)
AMCG00002110 NA coding downstream 7276 3717997 ~ 3730830 (+)
AMCG00002111 NA coding downstream 34127 3744848 ~ 3761328 (+)
AMCG00002109 slc45a1 coding downstream 68576 3779297 ~ 3786544 (+)
AMCG00002115 NA coding downstream 86534 3797255 ~ 3815714 (+)
AMCG00002114 NA coding downstream 127642 3838363 ~ 3842411 (+)
G120827 NA non-coding upstream 205265 3500337 ~ 3502927 (+)
G120823 NA non-coding upstream 214125 3491280 ~ 3494067 (+)
G120794 NA non-coding upstream 591768 3113450 ~ 3116424 (+)
G120779 NA non-coding upstream 607146 3100278 ~ 3101046 (+)
G120778 NA non-coding upstream 608050 3099607 ~ 3100142 (+)
G120928 NA non-coding downstream 77995 3788716 ~ 3791941 (+)
G120961 NA non-coding downstream 229735 3940456 ~ 3940716 (+)
G120974 NA non-coding downstream 376438 4087159 ~ 4087472 (+)
G121044 NA non-coding downstream 870133 4580854 ~ 4581879 (+)
G121045 NA non-coding downstream 871252 4581973 ~ 4582280 (+)
AMCG00002098 NA other upstream 166015 3533814 ~ 3542177 (+)
G120742 NA other upstream 748717 2956908 ~ 2959475 (+)
AMCG00002076 NA other upstream 854065 2852154 ~ 2854127 (+)
G120518 NA other upstream 1767376 1924022 ~ 1940816 (+)
AMCG00002019 NA other upstream 2715428 682670 ~ 992764 (+)
AMCG00002152 NA other downstream 1508109 5218830 ~ 5226656 (+)
AMCG00002190 acot7 other downstream 2875933 6586654 ~ 6602608 (+)
AMCG00002215 NA other downstream 3683079 7393800 ~ 7411230 (+)
AMCG00002245 NA other downstream 5028050 8738771 ~ 8792478 (+)
AMCG00002272 NA other downstream 6133484 9844205 ~ 9851312 (+)

Expression


Co-expression Network