AMCG00002115


Basic Information

Item Value
gene id AMCG00002115
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 3797255 ~ 3815714 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002115
ATGCACAGCCCATTACCAGTGCTGAGTTTACACAGCAGActgggacagacacacacgtcAGTGACGCAAAGGCCGAGGTCGCCTGAGAAGGCGGCGGTGTATTTTCACTGTGCCGTGCCCATCGCCCTCTCAGCCAGAGTGTTGTGCTGTCGGGACCGGGGGGAGACCAGGCAAGCGTCACCGGGGGAGCCCTCTGCACCGGCTGCTCCCTGCCCCGAGCCCAGCGCGGCCGCTGCCATGCTGCCACGCGTGGATGTGATTGTGGTGGGCGCAGGGAACCGTGGGGAGACATACGCCCGCTTCGCCCTCCTGCACCCCCAGCGTATGAGGGTGGTGGGAGTTGCCGACCCCAAACCCTTTGCCCGTGAGAAACTACGGGAACAGCACCAGATCGCGGAGAGCAACACCTTTGAGGACTGGCGCATTGTGGCCGAGAGGGAGAAATTTGCTGATGCCGTCATCATCGCCACCCCCGACCGCCTTCACAAGGACCCGGCGGTGGCCTTTGCCCGCAGAGGGTATCACGTCCTCCTGGAGAAGCCCATGGCGgtgaCTGCGGCAGACTGCTCAGAGATCGTGTCGGCCTGTGCTCAGAGCGCGGTGATGCTGGCAGTGTGTCATGTGCTCCGATACGACCCGGCTGTCCGCAAGATAAAGGAGCTGATTGGCTGTGGTGCGATCGGCGATGTTGTTCACATTCAACATTTGGAGCCGGTGGGGTTCTATCACTTCGCCCACTCGTTTGTACGGGGGAACTGGCGGAACGAGGAGGAAAGCTCCTTCTCCCTGTTGGCCAAGTCCTGCCACGACCTCGACCTCATTCACCATTGGGCCGGCGGTCGGAGCCCCCGGAGGCAACAGAACGCTGCCTGGACTGCCCTGCGGACCGGTCCGTACGGCCGCTGCGTCTACCAGTGCGACAACGATGTCTGCTCCAATCAGGTCGTCAATATGGAGTTCGAAGGAGGCGTCACGGCCGCTTTCTCCATGGTGGCCTTCACGGAGGAGATCTGCAATCGCAAGACCACCATCCATGGCAGCAAGGGGGAGCTCTGCTGGAACGGGGGGTCTCAGGTTCAAGTGTTTGACTTCCTGAGCCAGCGCACCACGCAGCACAACGCAGAATCCAAGGTCCCGGGGAACTTCAGCCTTGTTGGGCACGGGGGAGCCGACTACCACCTCATAGACAGCTTCATCTCTGCCGTGGCCtgtggGGACCCATCGCTGATCCGCTCCGGCCCCGAGGAGACCCTGTCCAGTCACCGGCTGGTGTTCGAGGCAGAGCGCGCGCGCAGGGAGAGCAGGGTGGTGTTCTGTGGAGCGGAGGAGGACTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002115 True 1335 mRNA 0.63 15 3797255 3815714

Neighbor

gene id symbol gene type direction distance location
AMCG00002109 slc45a1 coding upstream 10711 3779297 ~ 3786544 (+)
AMCG00002111 NA coding upstream 35927 3744848 ~ 3761328 (+)
AMCG00002110 NA coding upstream 66425 3717997 ~ 3730830 (+)
AMCG00002112 NA coding upstream 86534 3708192 ~ 3710721 (+)
AMCG00002105 NA coding upstream 155096 3628451 ~ 3642159 (+)
AMCG00002114 NA coding downstream 22649 3838363 ~ 3842411 (+)
AMCG00002119 NA coding downstream 70773 3886487 ~ 3897924 (+)
AMCG00002124 pax7a,pax7,LOC107708260,LOC105907504 coding downstream 167956 3983670 ~ 3987843 (+)
AMCG00002125 NA coding downstream 204514 4020228 ~ 4021143 (+)
AMCG00002126 pax7 coding downstream 216420 4032134 ~ 4033552 (+)
G120928 NA non-coding upstream 5314 3788716 ~ 3791941 (+)
G120827 NA non-coding upstream 294328 3500337 ~ 3502927 (+)
G120823 NA non-coding upstream 303188 3491280 ~ 3494067 (+)
G120794 NA non-coding upstream 680831 3113450 ~ 3116424 (+)
G120779 NA non-coding upstream 696209 3100278 ~ 3101046 (+)
G120961 NA non-coding downstream 124742 3940456 ~ 3940716 (+)
G120974 NA non-coding downstream 271445 4087159 ~ 4087472 (+)
G121044 NA non-coding downstream 765140 4580854 ~ 4581879 (+)
G121045 NA non-coding downstream 766259 4581973 ~ 4582280 (+)
G121114 NA non-coding downstream 933414 4749128 ~ 4752334 (+)
AMCG00002098 NA other upstream 255078 3533814 ~ 3542177 (+)
G120742 NA other upstream 837780 2956908 ~ 2959475 (+)
AMCG00002076 NA other upstream 943128 2852154 ~ 2854127 (+)
G120518 NA other upstream 1856439 1924022 ~ 1940816 (+)
AMCG00002019 NA other upstream 2804491 682670 ~ 992764 (+)
AMCG00002152 NA other downstream 1403116 5218830 ~ 5226656 (+)
AMCG00002190 acot7 other downstream 2770940 6586654 ~ 6602608 (+)
AMCG00002215 NA other downstream 3578086 7393800 ~ 7411230 (+)
AMCG00002245 NA other downstream 4923057 8738771 ~ 8792478 (+)
AMCG00002272 NA other downstream 6028491 9844205 ~ 9851312 (+)

Expression


Co-expression Network