AMCG00002118


Basic Information

Item Value
gene id AMCG00002118
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 3817822 ~ 3824170 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002118
ATGCCCCGGGGACGATCAGCCACTAGTGTCCACTCAGACAGCAGTGAGATGGACATTGACGGAATCGCAGAGTCAGAGCTGGCGAAGCTACAGAGACAGTTTCGCATCATGGAGGGGGATCGGCAGGCCTATGGGGTCGAGTCCCAGGACTTAATTAACCGGCAGCTcgctgtgcagcagcagcacctcCAGTGCAGCTTCAAGCAGTTCACAGCATCCTCGCGGGACCAGGGGGTCACCCAGAGCCTGCAGGCGGCGCTGGAGCACAAACAGCAGGTGGAGGAGCAGCTGAGGGCCGAGAAACTCTGCGTGGTCCAGCTGGAACAGGAGATCGCCGACCTGGAGCGGAAGCTGTCCAATCAGAGGCGGGGGGGTGGCAGTGCCACACGGAGCCAGAAACCCCCGGCCCGGAAGACCCAGAAAGCCTGCCGCACCCTGGAGAACAAACTGGAGCGGGCCCTGACGCGGTTCAACGAGCAGCTGACCAAGAACGGCAACTTGCGGGAGGAGCTGGACACGCTGTGGGGGGAGCAGGCCAGGTTCCAGCAGCTGTTCCGCAGACTGGACAAGGAGCTGCAGGAGATCCGCAAGGAGATCGGCGCCATGATTGACACCTCCACGGCCGCCTACGATGCCAGGGTGGAGTCGCAGTCCAAGATCGTGCTGCTGAAGGAGAAGGCGGTGAAGGACCTGGCCCAGTACAGCGCCGAGAtgaaggagctggagagggTCATTGCACACGATCGGCTGCTCAAGGAGTTCATGACCACCAAGAGCCACGAGAGGACGGACCAGGACGAGGGCCGGGACACGCAGCGCAGGCCGGCGTCGGAGGAGAAGGAGCGCCGGAAGGCCGATCCCCGGGAGGACACGCCCGAGACCATGGAGGCGGCCTACCAGCACATCCAAAGCATAACCAGAGAGAAGGACCTGGATATCCTAGTCAAGGGGTTCATAGAGGTCGAGGACCGGAACTTCGCGCTCTTCAACTACGTGAACGAGCAGAACAACGAGGCCGAGACCCTGCAGGACTCGATTGGCCAGATCCAGCAGGAGATGGAGCACTTCCGGTCCCAAGGGCAGCGGCAGCAGGAGGAACACAGGGCCCTAATGAGGGACATCGAGCAGCGGCAGAGAGACACGCAGGTGCAGATGCAGGACTTCGAGCACCGGGCCACAGCGGCCAGCAAGGCCCTGGACCAGCTCAAGACAGGAGTGGACGGCATGTTCCAGAAGATGGAGTGCGACCGCTCGGTCATCGAGGACATGCTGGGCTCGTCGGCTGGGATCAGGGACACCAACGTCATGACCTTCCTGGGGCTCGTGGAGCAGAAGACCAGCGAGCTGCTCACGGTGCAGTCTTACCTCAACTCCAAGGACTACGACAAGGAGTACGACCCGAAGGAAGTGGCCCGGGTCCTGCTGGGTCAGAGCCAAGAACTCCCCATCCAGTACCTGTCCATCCAGCCCCCATCCACTGGGTATGTCCCCACCACTGGGAGCGTTTCTCCGGGGACAGTGTCTGAGAACAGTGTGTTGCGCAAGGAGAAGGCCGTTCATCCCGACGGAGGGAAGGAGGTCAAAGCCTCCAAGACCAGCGTGGCATCCAACAGCAAGAGGCGCTCCCAGGAGGCCTGA

Function

GO: NA

KEGG:

id description
K23732 CCDC63_114; coiled-coil domain-containing protein 63/114

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002118 True 1638 mRNA 0.62 14 3817822 3824170

Neighbor

gene id symbol gene type direction distance location
AMCG00002116 NA coding downstream 23276 3789058 ~ 3794546 (-)
AMCG00002113 NA coding downstream 40609 3768155 ~ 3777213 (-)
AMCG00002108 NA coding downstream 156052 3641182 ~ 3661770 (-)
AMCG00002103 NA coding downstream 284003 3527352 ~ 3533819 (-)
AMCG00002102 NA coding downstream 306842 3503046 ~ 3510980 (-)
AMCG00002117 NA coding upstream 2006 3826176 ~ 3834827 (-)
AMCG00002121 NA coding upstream 87028 3911198 ~ 3918187 (-)
AMCG00002122 NA coding upstream 95063 3919233 ~ 3920341 (-)
AMCG00002120 mrps16 coding upstream 120967 3945137 ~ 3946555 (-)
AMCG00002131 NA coding upstream 395832 4220002 ~ 4253397 (-)
G120914 NA non-coding downstream 113458 3700492 ~ 3704364 (-)
G120853 NA non-coding downstream 276996 3538762 ~ 3540826 (-)
G120849 NA non-coding downstream 281297 3535822 ~ 3536525 (-)
G120842 NA non-coding downstream 314894 3500281 ~ 3502928 (-)
G120841 NA non-coding downstream 323772 3492956 ~ 3494050 (-)
G120975 NA non-coding upstream 262938 4087108 ~ 4087418 (-)
G121039 NA non-coding upstream 743269 4567439 ~ 4569294 (-)
G121111 NA non-coding upstream 892422 4716592 ~ 4722181 (-)
G121151 lrrc38,lrrc38b,LOC107691331,LOC107568719,LOC107555684,LOC108281009,LOC107685631 non-coding upstream 1286432 5110602 ~ 5116017 (-)
G121152 NA non-coding upstream 1303868 5128038 ~ 5137006 (-)
G120927 slc45a1,LOC107756616,LOC106565711,LOC107702000 other downstream 31278 3784236 ~ 3786544 (-)
G120907 NA other downstream 101570 3713867 ~ 3716252 (-)
AMCG00002097 NA other downstream 351361 3407485 ~ 3466461 (-)
AMCG00002091 LOC103354943,LOC102299287,LOC101482394,LOC108441428 other downstream 631469 3173505 ~ 3186353 (-)
AMCG00002094 vamp3,LOC107582408 other downstream 689382 3113442 ~ 3128440 (-)
G120993 NA other upstream 390545 4214715 ~ 4219877 (-)
AMCG00002167 NA other upstream 2151555 5975725 ~ 6015393 (-)
AMCG00002223 NA other upstream 4002471 7826641 ~ 7839411 (-)
AMCG00002265 NA other upstream 5784580 9608750 ~ 9620127 (-)
AMCG00002275 ube4b,LOC107681967,LOC107570768 other upstream 5933255 9757425 ~ 9801108 (-)

Expression


Co-expression Network