AMCG00002119


Basic Information

Item Value
gene id AMCG00002119
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 3886487 ~ 3897924 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002119
GGAAGGCGGAGGTTGGGCTCGCCTGTGCAGTCCTTTATAAGAGGCATCGCTCAGTGCGGCTCTATCAGTGTCTGTCCCGATCAATGAGAGGCCGTTTGATTTGTGAACTATTTGTGCGCTGTCTTTCTCTGACTATAGAGGGAAAACATAGACAAGCGCGTCTGGATataaacagcagcacagaggaTACGCTGAGCATGCACGCACACTGAAGAGCAGGACCGCGGGTTTGGGCTGCACACTACACTCGTCTGAAAGGTATGCCGGCAGCTGCCAGGTAGGACAGCACAGACTTTCTTGGCTTGGATGCGTCCCGATTGCGGCTGGAGCATGTCAACAGCAGGCCTCGCTGCCCAGGAGATCCGCGTCCCTCTCAAAAGCCCGTTCCTGCACAGCAGCCATTGCCACAGCATGGCCAGTGCCAAGCCCTACTGGGACCAGCACCATGACCTGGACAACCTGTACTGGATGGAGTACAACCTCAAACCACAGCAGCAGGTCCCTGCGTCTCTGAGCTTTGAGAggcaGCACTGTCACCCTCACTCTCCGCACAGCCCCAGCACCCAGCGCCTGCCCCCAAAGAAATCTCGCCCTTCCCAGCTGTTCCTGCCCTCGTGCGCTGACCCCTCCATGCCCAGCCCCCCAGAGGGCGACCAGGTGGTCCCTTCATTCCAGCGGCTGTCCGTGTACGAGCGCACGCCTCCTCACACCCCTGGCCGCGGGGCCAAGCCTCTGCCCCCCCTCCCGGGCCCGTACGGCGCGGACCTGTCCTCGGACGAGGCGGTGGACAGCGAGGTGGAGTTCTTCACCAGCGCAGATGACAGTCGCTGCCTGCCCGTGGCCCCGCGTCTGTCCTTGCACCACCACCCCGGCCACGCCCACGACAAGCCAGAGGTGCCCCCCCGCGTGCCCATCCCCCCACGTCCGGCCAAGGCAGCAGACTACCGCCGCTGGTCGGCAGAGGTGGCCTCAGGGGGCTACAGCGACGAGGACAAGCCTCCCAAGGTGCCCCCCCGGGAGCCCCTGTCCCGCAGCGGCTCCCGCACCCCCAGCCCCAAGAGCCTGCCCATGTACCTCAATGGCGTGATGCCCCCCACACAGAGCTTCGCCCCCGACCCGAAATACGTCAGCAAAGGCCTGCAGCGGCAGAACAGCGAGGGGTCGCCCACCTCCCGGACCCCCTGCATCCTGCCCATCATTGAGAACGGGAAGAAAGCCAGCCACACGCACTACTTCCTGCTCCCGCAGCGCCCCGTCTACCTGGACAAGTTCGAGCGCTTCTTCAAAGAGGCGGACTCTGGGTCCAGCCAGAGCGCTGCCCCCGGCCCGGACGCCAAATGGGACAGCCAGGCCAAACAGAGGCACCATGTGAACGTGGTGTCGCCCTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002119 True 1389 mRNA 0.64 5 3886487 3897924

Neighbor

gene id symbol gene type direction distance location
AMCG00002114 NA coding upstream 44076 3838363 ~ 3842411 (+)
AMCG00002115 NA coding upstream 70773 3797255 ~ 3815714 (+)
AMCG00002109 slc45a1 coding upstream 99943 3779297 ~ 3786544 (+)
AMCG00002111 NA coding upstream 125159 3744848 ~ 3761328 (+)
AMCG00002110 NA coding upstream 155657 3717997 ~ 3730830 (+)
AMCG00002124 pax7a,pax7,LOC107708260,LOC105907504 coding downstream 85746 3983670 ~ 3987843 (+)
AMCG00002125 NA coding downstream 122304 4020228 ~ 4021143 (+)
AMCG00002126 pax7 coding downstream 134210 4032134 ~ 4033552 (+)
AMCG00002123 pax7a,pax7,pax7b,LOC107708260 coding downstream 155870 4053794 ~ 4057620 (+)
AMCG00002127 park7,LOC107657982,LOC107701995 coding downstream 197426 4095350 ~ 4101806 (+)
G120928 NA non-coding upstream 94546 3788716 ~ 3791941 (+)
G120827 NA non-coding upstream 383560 3500337 ~ 3502927 (+)
G120823 NA non-coding upstream 392420 3491280 ~ 3494067 (+)
G120794 NA non-coding upstream 770063 3113450 ~ 3116424 (+)
G120779 NA non-coding upstream 785441 3100278 ~ 3101046 (+)
G120961 NA non-coding downstream 42532 3940456 ~ 3940716 (+)
G120974 NA non-coding downstream 189235 4087159 ~ 4087472 (+)
G121044 NA non-coding downstream 682930 4580854 ~ 4581879 (+)
G121045 NA non-coding downstream 684049 4581973 ~ 4582280 (+)
G121114 NA non-coding downstream 851204 4749128 ~ 4752334 (+)
AMCG00002098 NA other upstream 344310 3533814 ~ 3542177 (+)
G120742 NA other upstream 927012 2956908 ~ 2959475 (+)
AMCG00002076 NA other upstream 1032360 2852154 ~ 2854127 (+)
G120518 NA other upstream 1945671 1924022 ~ 1940816 (+)
AMCG00002019 NA other upstream 2893723 682670 ~ 992764 (+)
AMCG00002152 NA other downstream 1320906 5218830 ~ 5226656 (+)
AMCG00002190 acot7 other downstream 2688730 6586654 ~ 6602608 (+)
AMCG00002215 NA other downstream 3495876 7393800 ~ 7411230 (+)
AMCG00002245 NA other downstream 4840847 8738771 ~ 8792478 (+)
AMCG00002272 NA other downstream 5946281 9844205 ~ 9851312 (+)

Expression


Co-expression Network