AMCG00002122


Basic Information

Item Value
gene id AMCG00002122
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 3919233 ~ 3920341 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002122
ATGTCATCAACCTCTACTCTCTCCACTGAATCACACACTTCTGTGACATCAAATGTTCCTCATACTTCTAAAGAAACTAGTCTAAAGCATACAAGTACAAAGACACCTCACACTACAGAAGAACCCTCGTCATCTGGAACACATTCAACACATATCACaccagaagagaaaaataaatcgtTAACCTCTACTGTGTCCACAGAATCACACACTTCAATCACATCAAATGTTCCTCATTCTTCTACAGAAACTACTGAACATCATACAACGTCACCTCACACAACAGAAGAACCATCTTCATCTGGAAAACATTCAACACATTTCACACCAGAAGAGAAAAATACTTTATCAACCTCTACTCTCTCCACTGAATCACACACTTCTGTGACATCAAATGTTCCTCATACTTCTAAAGAAACTAGTCTAAAGCATACAAGTACAAAGTCACCTCACACTACAGAAGAACCATCCTCCACTGGAAAACACTCAACACATTTCACaccagaagagaaaaataaatcgtCAACCTCTACTGTCTCAACTGAATCACACACTTCTCTGACATCAAATGTTCCTCATTCTTCTACAGAAACAACTGAACAACACACGACATCACCTCACACAACAGAAGAACCATCTTCCacagaaaaacattcaacacaTATCACACCAGAAGAGAAAAATTCTTCATCAACCTCTACTCTCTCCACAGAATCACACACTTCAGTCACATCAAATGTTCCTCATTCTTCTACAAAAACTATTGAACAACACACAACGTCACCTCACACAACAGAAGAACCATCTTCCacagaaaaacattcaacacaCTTCACaccagaagagaaaaataaatcttcaaccTCTACTCTCTCCACAGAATCACACACTTCTGTGACATCAAATGTTCCTAATTCTTCTACAGAAACTACTCTAAAGCATACAAGTACAAGAAGAACCATCCTTCACTGGAAAACATTCAACACATTTCACACCAGAAGAGAAAAATACTTCATCAACCTCTACTCTCACCACAGAATCACACACCTCTGTGACATCAAATGTGCCTCATTCTTCTGCAAAAACTACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002122 True 1092 mRNA 0.38 2 3919233 3920341

Neighbor

gene id symbol gene type direction distance location
AMCG00002121 NA coding downstream 1046 3911198 ~ 3918187 (-)
AMCG00002117 NA coding downstream 84406 3826176 ~ 3834827 (-)
AMCG00002118 NA coding downstream 95063 3817822 ~ 3824170 (-)
AMCG00002116 NA coding downstream 124687 3789058 ~ 3794546 (-)
AMCG00002113 NA coding downstream 142020 3768155 ~ 3777213 (-)
AMCG00002120 mrps16 coding upstream 24796 3945137 ~ 3946555 (-)
AMCG00002131 NA coding upstream 299661 4220002 ~ 4253397 (-)
AMCG00002132 glut1a,LOC106583009,LOC106565867,LOC107569806,LOC107666081,LOC107549315 coding upstream 493941 4414282 ~ 4423276 (-)
AMCG00002136 NA coding upstream 650635 4570976 ~ 4579172 (-)
AMCG00002139 NA coding upstream 673811 4594152 ~ 4600114 (-)
G120914 NA non-coding downstream 214869 3700492 ~ 3704364 (-)
G120853 NA non-coding downstream 378407 3538762 ~ 3540826 (-)
G120849 NA non-coding downstream 382708 3535822 ~ 3536525 (-)
G120842 NA non-coding downstream 416305 3500281 ~ 3502928 (-)
G120841 NA non-coding downstream 425183 3492956 ~ 3494050 (-)
G120975 NA non-coding upstream 166767 4087108 ~ 4087418 (-)
G121039 NA non-coding upstream 647098 4567439 ~ 4569294 (-)
G121111 NA non-coding upstream 796251 4716592 ~ 4722181 (-)
G121151 lrrc38,lrrc38b,LOC107691331,LOC107568719,LOC107555684,LOC108281009,LOC107685631 non-coding upstream 1190261 5110602 ~ 5116017 (-)
G121152 NA non-coding upstream 1207697 5128038 ~ 5137006 (-)
G120927 slc45a1,LOC107756616,LOC106565711,LOC107702000 other downstream 132689 3784236 ~ 3786544 (-)
G120907 NA other downstream 202981 3713867 ~ 3716252 (-)
AMCG00002097 NA other downstream 452772 3407485 ~ 3466461 (-)
AMCG00002091 LOC103354943,LOC102299287,LOC101482394,LOC108441428 other downstream 732880 3173505 ~ 3186353 (-)
AMCG00002094 vamp3,LOC107582408 other downstream 790793 3113442 ~ 3128440 (-)
G120993 NA other upstream 294374 4214715 ~ 4219877 (-)
AMCG00002167 NA other upstream 2055384 5975725 ~ 6015393 (-)
AMCG00002223 NA other upstream 3906300 7826641 ~ 7839411 (-)
AMCG00002265 NA other upstream 5688409 9608750 ~ 9620127 (-)
AMCG00002275 ube4b,LOC107681967,LOC107570768 other upstream 5837084 9757425 ~ 9801108 (-)

Expression


Co-expression Network