AMCG00002135


Basic Information

Item Value
gene id AMCG00002135
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 4554678 ~ 4557375 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002135
ATGCCCCCGGGGCAGCTGATAACGTACACGCAGATCCAGCCCCACCAGCTGATCCAGCACCAGCAGCACAAGCAGCACCAGTTTGTGATCCAGCAGCAGACCCAGCTCCCGCAGAGGAGCCAAGCCCAGCTCCTCCACACGGCCTCCATCCAGCCCCAGCTGCAGACACAGGCCCAGACCGTGCAGGCCCTCACCATCCAGCCCGCGGTGGCTGCCCAGCCCCAGAGCCAACAGTGTACCATCCCGGTCTTGCCCAAACCTCCCAGCCACCAGCCCCCAGGACCGAGCCCTCAGGCCACCATCTTCCACTCCACAGTGAGTCCCCAGACGCTGCAACACAACGGGCAACCCACCCCGATGCACCAGGCCCCACAGCCCAAACCTCAGCCCGTTCAACTGGCAGCCGTCAACCTTCAGATCCAGCCCACGCCTAATTCGACCCCTCGGCTGATCCAGGACAGCGTGAGTAAAGACAAGGGTGCTGCCGCGTTGCCCCGGGAGGCCTGTCCGAACCCCAGTGTCCTGCAAGTCGCTTCTGCTGCCCCTCCGACCACAACCACCACGGAGCAACGCAAGCCAGACGCCAGCAAGCCCACTGTGCCAGGTACTGCCAACACCATCAATTTACACTATTCTAGATTGCTGAAGAGTGAGCGTTCAACTCTGAGAAAGGCCGCCTGTGCCAAGAGTGGCCTGATCGGCTCGGAGCGCGGAGGCCGTTACGTCAGTGCCATCTGTATGTCCGCTAGCCGCCCACAAAGGCCTTGCCTGCTCGCTCTCTCCCCTCAAGCGGAAGAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002135 True 801 mRNA 0.63 4 4554678 4557375

Neighbor

gene id symbol gene type direction distance location
AMCG00002130 kcnab2a,LOC108431628,LOC108255041 coding upstream 334801 4192660 ~ 4219877 (+)
AMCG00002129 LOC108434650,LOC107672035,LOC107706553,LOC107592856,LOC107701994 coding upstream 378831 4175632 ~ 4175847 (+)
AMCG00002128 kcnab2,LOC106565914,LOC101463812,LOC102294726,LOC107701994,LOC108231619 coding upstream 399755 4154546 ~ 4154923 (+)
AMCG00002127 park7,LOC107657982,LOC107701995 coding upstream 452872 4095350 ~ 4101806 (+)
AMCG00002123 pax7a,pax7,pax7b,LOC107708260 coding upstream 497058 4053794 ~ 4057620 (+)
AMCG00002134 NA coding downstream 5537 4562912 ~ 4569268 (+)
AMCG00002133 NA coding downstream 27060 4584435 ~ 4586858 (+)
AMCG00002140 LOC107727752 coding downstream 133591 4690966 ~ 4721931 (+)
AMCG00002143 NA coding downstream 231137 4788512 ~ 4791668 (+)
AMCG00002145 LOC102295218,LOC102203423,LOC101487531,LOC102781222 coding downstream 405679 4963054 ~ 4967720 (+)
G120974 NA non-coding upstream 467206 4087159 ~ 4087472 (+)
G120961 NA non-coding upstream 613962 3940456 ~ 3940716 (+)
G120928 NA non-coding upstream 762737 3788716 ~ 3791941 (+)
G120827 NA non-coding upstream 1051751 3500337 ~ 3502927 (+)
G120823 NA non-coding upstream 1060611 3491280 ~ 3494067 (+)
G121044 NA non-coding downstream 23479 4580854 ~ 4581879 (+)
G121045 NA non-coding downstream 24598 4581973 ~ 4582280 (+)
G121114 NA non-coding downstream 191753 4749128 ~ 4752334 (+)
G121176 NA non-coding downstream 644027 5201402 ~ 5202462 (+)
G121178 dhrs3 non-coding downstream 645474 5202849 ~ 5204614 (+)
AMCG00002098 NA other upstream 1012501 3533814 ~ 3542177 (+)
G120742 NA other upstream 1595203 2956908 ~ 2959475 (+)
AMCG00002076 NA other upstream 1700551 2852154 ~ 2854127 (+)
G120518 NA other upstream 2613862 1924022 ~ 1940816 (+)
AMCG00002019 NA other upstream 3561914 682670 ~ 992764 (+)
AMCG00002152 NA other downstream 661455 5218830 ~ 5226656 (+)
AMCG00002190 acot7 other downstream 2029279 6586654 ~ 6602608 (+)
AMCG00002215 NA other downstream 2836425 7393800 ~ 7411230 (+)
AMCG00002245 NA other downstream 4181396 8738771 ~ 8792478 (+)
AMCG00002272 NA other downstream 5286830 9844205 ~ 9851312 (+)

Expression


Co-expression Network