Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00002151 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 5238311 ~ 5240700 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00002151 | True | 731 | mRNA | 0.60 | 4 | 5238311 | 5240700 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00002150 | vps13d | coding | upstream | 42218 | 5128059 ~ 5196093 (+) |
| AMCG00002149 | lrrc38,LOC107685631,LOC106582984 | coding | upstream | 148439 | 5084895 ~ 5089872 (+) |
| AMCG00002147 | LOC106565894,LOC106582986 | coding | upstream | 201526 | 5034310 ~ 5036785 (+) |
| AMCG00002148 | ephb2,LOC104917933,LOC108439490,LOC102781222 | coding | upstream | 215627 | 5014750 ~ 5022684 (+) |
| AMCG00002146 | ephb2 | coding | upstream | 237803 | 4997545 ~ 5000508 (+) |
| AMCG00002159 | NA | coding | downstream | 529552 | 5770252 ~ 5776525 (+) |
| AMCG00002156 | rcc2,LOC107687402,LOC107712686 | coding | downstream | 620738 | 5861438 ~ 5872711 (+) |
| AMCG00002161 | NA | coding | downstream | 673571 | 5914271 ~ 5916094 (+) |
| AMCG00002160 | NA | coding | downstream | 678926 | 5919626 ~ 5938059 (+) |
| AMCG00002163 | dvl1,LOC102777744 | coding | downstream | 699185 | 5939885 ~ 5962194 (+) |
| G121187 | NA | non-coding | upstream | 10212 | 5227674 ~ 5228099 (+) |
| G121178 | dhrs3 | non-coding | upstream | 33697 | 5202849 ~ 5204614 (+) |
| G121176 | NA | non-coding | upstream | 35849 | 5201402 ~ 5202462 (+) |
| G121114 | NA | non-coding | upstream | 485977 | 4749128 ~ 4752334 (+) |
| G121045 | NA | non-coding | upstream | 656031 | 4581973 ~ 4582280 (+) |
| G121198 | NA | non-coding | downstream | 3009 | 5243709 ~ 5275923 (+) |
| G121228 | NA | non-coding | downstream | 233436 | 5474136 ~ 5570247 (+) |
| G121402 | NA | non-coding | downstream | 1036818 | 6277518 ~ 6277900 (+) |
| G121417 | NA | non-coding | downstream | 1086497 | 6327197 ~ 6327481 (+) |
| G121526 | NA | non-coding | downstream | 1552276 | 6792976 ~ 6798043 (+) |
| AMCG00002152 | NA | other | upstream | 11655 | 5218830 ~ 5226656 (+) |
| AMCG00002098 | NA | other | upstream | 1696134 | 3533814 ~ 3542177 (+) |
| G120742 | NA | other | upstream | 2278836 | 2956908 ~ 2959475 (+) |
| AMCG00002076 | NA | other | upstream | 2384184 | 2852154 ~ 2854127 (+) |
| G120518 | NA | other | upstream | 3297495 | 1924022 ~ 1940816 (+) |
| AMCG00002190 | acot7 | other | downstream | 1345954 | 6586654 ~ 6602608 (+) |
| AMCG00002215 | NA | other | downstream | 2153100 | 7393800 ~ 7411230 (+) |
| AMCG00002245 | NA | other | downstream | 3498071 | 8738771 ~ 8792478 (+) |
| AMCG00002272 | NA | other | downstream | 4603505 | 9844205 ~ 9851312 (+) |
| AMCG00002294 | rere | other | downstream | 5327212 | 10567912 ~ 10604839 (+) |
