AMCG00002162 (dvl1)


Basic Information

Item Value
gene id AMCG00002162
gene name dvl1
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 5962197 ~ 5972847 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002162
ATGGGCACGCCCACTCTGCTGGAGTGTTTCGGTCACCCCAGGAGACCCCCGGCCCAGCACGGGGCACCGCGACATCACCGCCTTGCCAGAGCCTTCCAGCCAATCAGGTGCTACCCCGAGACCCAGCCCCGCCCACAGCAGTGTACAGTTACTCCATCTAAcatctctttcctctctctgccCTTCCCTCTTACTCCTTTGTCCTTAAACTGTCCCCCTCCCCGACACTTTTTGATGTCCTTGCCATTTCTCTCAGTCTCTAACCAGTCTCCCTTGTGCGCTGTGTCTCTGGCAGTCCCGCGTGTGAACGGTCACTCCAAAGTGGAGCGAGTGGCGCGGGACTCGGCCATGGGCTACGACAGCGCCTCTATGATGAGCAGCGAGCTGGAGTCCAGCTCCTTCATCgacagcgaggaggaggaggacgccAGCAGACTCAGCAGCTCCACAGAGCAGAGCTCCTCCTCTCGATTGATGCGGAGACACAAACGACGCCGGCGGCGACACAAGGTGGCCAAAATCGATCGGTCTTCTTCGTTCAGCAGCATCACTGACTCCACTATGAGCCTCAACATCATCACTGTCACTCTCAACATGGAGAAGTACAATTTCCTGGGCATCAGTATAGTGGGACAGAGCAACGACCGGGGGGACGGGGGGATCTATATCGGCTCCATCATGAAGGGTGGGGCTGTGGCAGCAGACGGGAGGATCGAGCCGGGAGATATGCTGCTACAGGTAAACGACGTGAACTTTGAGAACATGAGCAACGACGACGCTGTGCGGATCCTGAGAGAGATCGTCTCCAAGCCAGGCCCCATCAGTCTGACGGTGGCCAAGTGCTGGGACCCCTCTCCTAGGAGCTACTTCACCATCCCCCGAGCGGAGCCAGTGAGACCCATCGACCCCGCGGCCTGGATCTCTCACACCACTGCGCTGACCGGGCCCTACCCGCACTACGGTACTGTCGCGGCCCCGACCTCTGAGTTCGACGACTTGCCGCTTTCCGTCAGTAAGACCGACATGGCAACCATCGTAAAGGTGATGCAGCTGCCCGATTCTGGACTAGAGATCAGAGACCGGATGTGGCTGAAGATCACCATTGCCAACGCTGTCATTGGGGCGGACGTGGTGGACTGGCTTTACTCGCGAGTGGACGGGTTCAAAGACCGCCGCGACGCCCGGAAGTATGCCAGCAGTCTGCTGAAACACGGCTACCTGAGGCACACCGTCAACAAGATCACCTTCTCCGAGCAGTGCTACTACACTTTCGGGGACCTCTGCCAGAACATGGCTTCTCTGAACCTGAATGAGGGCTCCAGTGGCGGGGGCTCGGAGCAGGACACCCTGGCGCCCCTTCCTCCCCCCTCCACGAATCCCTGGCCCATGGGGGGGCAGCCATTCCCCTACCCGCCCTACCCCTCCGCCCCGCCCGGGTTCCCCCCGGGATACTCGGACCCCTGCCACAGCTTCCACAGCGGCAGCGCCGGCAGCCAGCACAGCGAGGGCAGCAGAAGCAGTGGCTCCAACCCAAGCGCAGGGAAAGGCCGACGCCCCTCCCCCCGGGAGAAGGACCGCAAGTCGACAGGCAGCGGGGGCAGCGAATCAGAGCTCGGCACGCGGGGAGGGAGGCGGGGCGAGCGGTCAGCCAGCCAGATGAGCCACCACAGCCACGCCCACTCCAGCCACAGCCACGCCCACTCCAGCCACAGCCACGCCCGATCTAGCCACAGCCACGCACTTTCCCACCGAAGTCATACCCACTCTCAGCACAACCATGCCTCCTTCTCCTATAGCCACGCCCCCTATTCCCAGCACAGCCACGCTTCCTGTTCCCACAGCGAAAGAAGCCACGCTTCCTCCTATGGCCCCCCCGGCCTGCCCCCACCATACAGCCTGGCCCGGCTGGCCCCCAAGGCCCCGGTGAGCAGCGGTCCCCCTGGGGCTCCACCGGTGCGCGAACTGGGGGCCGTCCCCCCCGAACTCACTGCCAGCCGCCAGTCTTTCCAGCATGCTATGGGTAACCCCTGCGAGTTCTTTGTGGACATCATGTGA

Function

symbol description
dvl1 Enables frizzled binding activity; identical protein binding activity; and protein kinase binding activity. Involved in several processes, including Wnt signaling pathway; protein stabilization; and regulation of cellular protein metabolic process. Located in cytoplasmic vesicle; growth cone; and lateral plasma membrane. Implicated in DiGeorge syndrome and autosomal dominant Robinow syndrome 2.

NR:

description
PREDICTED: segment polarity protein dishevelled homolog DVL-1 isoform X3

GO:      GO:0044699

KEGG:

id description
K02353 DVL; segment polarity protein dishevelled

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002162 True 2055 mRNA 0.62 12 5962197 5972847

Neighbor

gene id symbol gene type direction distance location
AMCG00002163 dvl1,LOC102777744 coding upstream 3 5939885 ~ 5962194 (+)
AMCG00002160 NA coding upstream 24138 5919626 ~ 5938059 (+)
AMCG00002161 NA coding upstream 46103 5914271 ~ 5916094 (+)
AMCG00002156 rcc2,LOC107687402,LOC107712686 coding upstream 89486 5861438 ~ 5872711 (+)
AMCG00002159 NA coding upstream 185672 5770252 ~ 5776525 (+)
AMCG00002165 NA coding downstream 24 5972871 ~ 5975345 (+)
AMCG00002170 NA coding downstream 128056 6100903 ~ 6104554 (+)
AMCG00002169 emc1,k0090,LOC106572884 coding downstream 136372 6109219 ~ 6120051 (+)
AMCG00002168 ubr4 coding downstream 147706 6120553 ~ 6168690 (+)
AMCG00002171 LOC106565910,LOC106582958 coding downstream 198232 6171079 ~ 6173906 (+)
G121228 NA non-coding upstream 391950 5474136 ~ 5570247 (+)
G121198 NA non-coding upstream 686274 5243709 ~ 5275923 (+)
G121187 NA non-coding upstream 734098 5227674 ~ 5228099 (+)
G121178 dhrs3 non-coding upstream 757583 5202849 ~ 5204614 (+)
G121176 NA non-coding upstream 759735 5201402 ~ 5202462 (+)
G121402 NA non-coding downstream 304671 6277518 ~ 6277900 (+)
G121417 NA non-coding downstream 354350 6327197 ~ 6327481 (+)
G121526 NA non-coding downstream 820129 6792976 ~ 6798043 (+)
G121680 NA non-coding downstream 1588219 7561066 ~ 7562732 (+)
G121688 ski,LOC106572818 non-coding downstream 1673871 7646718 ~ 7648316 (+)
AMCG00002152 NA other upstream 735541 5218830 ~ 5226656 (+)
AMCG00002098 NA other upstream 2420020 3533814 ~ 3542177 (+)
G120742 NA other upstream 3002722 2956908 ~ 2959475 (+)
AMCG00002076 NA other upstream 3108070 2852154 ~ 2854127 (+)
G120518 NA other upstream 4021381 1924022 ~ 1940816 (+)
AMCG00002190 acot7 other downstream 613807 6586654 ~ 6602608 (+)
AMCG00002215 NA other downstream 1420953 7393800 ~ 7411230 (+)
AMCG00002245 NA other downstream 2765924 8738771 ~ 8792478 (+)
AMCG00002272 NA other downstream 3871358 9844205 ~ 9851312 (+)
AMCG00002294 rere other downstream 4595065 10567912 ~ 10604839 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location