Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00002165 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 5972871 ~ 5975345 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00002165 | True | 756 | mRNA | 0.55 | 7 | 5972871 | 5975345 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00002162 | dvl1 | coding | upstream | 24 | 5962197 ~ 5972847 (+) |
| AMCG00002163 | dvl1,LOC102777744 | coding | upstream | 10677 | 5939885 ~ 5962194 (+) |
| AMCG00002160 | NA | coding | upstream | 34812 | 5919626 ~ 5938059 (+) |
| AMCG00002161 | NA | coding | upstream | 56777 | 5914271 ~ 5916094 (+) |
| AMCG00002156 | rcc2,LOC107687402,LOC107712686 | coding | upstream | 100160 | 5861438 ~ 5872711 (+) |
| AMCG00002170 | NA | coding | downstream | 125558 | 6100903 ~ 6104554 (+) |
| AMCG00002169 | emc1,k0090,LOC106572884 | coding | downstream | 133874 | 6109219 ~ 6120051 (+) |
| AMCG00002168 | ubr4 | coding | downstream | 145208 | 6120553 ~ 6168690 (+) |
| AMCG00002171 | LOC106565910,LOC106582958 | coding | downstream | 195734 | 6171079 ~ 6173906 (+) |
| AMCG00002175 | NA | coding | downstream | 225517 | 6200862 ~ 6207882 (+) |
| G121228 | NA | non-coding | upstream | 402624 | 5474136 ~ 5570247 (+) |
| G121198 | NA | non-coding | upstream | 696948 | 5243709 ~ 5275923 (+) |
| G121187 | NA | non-coding | upstream | 744772 | 5227674 ~ 5228099 (+) |
| G121178 | dhrs3 | non-coding | upstream | 768257 | 5202849 ~ 5204614 (+) |
| G121176 | NA | non-coding | upstream | 770409 | 5201402 ~ 5202462 (+) |
| G121402 | NA | non-coding | downstream | 302173 | 6277518 ~ 6277900 (+) |
| G121417 | NA | non-coding | downstream | 351852 | 6327197 ~ 6327481 (+) |
| G121526 | NA | non-coding | downstream | 817631 | 6792976 ~ 6798043 (+) |
| G121680 | NA | non-coding | downstream | 1585721 | 7561066 ~ 7562732 (+) |
| G121688 | ski,LOC106572818 | non-coding | downstream | 1671373 | 7646718 ~ 7648316 (+) |
| AMCG00002152 | NA | other | upstream | 746215 | 5218830 ~ 5226656 (+) |
| AMCG00002098 | NA | other | upstream | 2430694 | 3533814 ~ 3542177 (+) |
| G120742 | NA | other | upstream | 3013396 | 2956908 ~ 2959475 (+) |
| AMCG00002076 | NA | other | upstream | 3118744 | 2852154 ~ 2854127 (+) |
| G120518 | NA | other | upstream | 4032055 | 1924022 ~ 1940816 (+) |
| AMCG00002190 | acot7 | other | downstream | 611309 | 6586654 ~ 6602608 (+) |
| AMCG00002215 | NA | other | downstream | 1418455 | 7393800 ~ 7411230 (+) |
| AMCG00002245 | NA | other | downstream | 2763426 | 8738771 ~ 8792478 (+) |
| AMCG00002272 | NA | other | downstream | 3868860 | 9844205 ~ 9851312 (+) |
| AMCG00002294 | rere | other | downstream | 4592567 | 10567912 ~ 10604839 (+) |
