AMCG00002166


Basic Information

Item Value
gene id AMCG00002166
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 5874782 ~ 5883711 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002166
ATGTCTGACGTGTATAGCTGCATCATGCCATTGCTGGGGGTGGTGTTTGCAGCATGCGAGTGGACAGTATGCTCCCGAGAGTACATTGAGTTCAGATTTGATCAAGACACAGCCAGCTGGGCCCTGGGTCACTGCCAGGCCTGTGAGGAGAGCAGCGCCTGTGAGAGGCCCTGTGCAGGACCAAATGGACACCTGTTTAGAAGTGTGGGGAATGAAAAAAGAGTGGATGGTATTGTCAGTAATCCACAGCTTCAGGAAGCTAATGACTTTGTCCAGGTTAACATGATCGTGTTGGGCAAGAACCTGGGCATCCCCAAACCGTATGGCCCCAAGGTGGGCGGCCACTGCGCCCTAGATGTGCTCCCTGGTGGAAGGCCTGGGCCTGAGCTGCACCTTCATTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002166 True 402 mRNA 0.54 4 5874782 5883711

Neighbor

gene id symbol gene type direction distance location
AMCG00002157 LOC106565901,LOC108438575,LOC104956748,LOC102783840,LOC107751159 coding downstream 47257 5804842 ~ 5827525 (-)
AMCG00002158 NA coding downstream 88750 5760834 ~ 5786032 (-)
AMCG00002155 igsf21,LOC108438574 coding downstream 588000 5264007 ~ 5286782 (-)
AMCG00002153 NA coding downstream 619996 5252375 ~ 5254786 (-)
AMCG00002154 dhrs3,LOC106582983 coding downstream 660374 5201418 ~ 5214408 (-)
AMCG00002164 LOC107385009 coding upstream 4779 5888490 ~ 5903073 (-)
AMCG00002173 megf6 coding upstream 150133 6033844 ~ 6085952 (-)
AMCG00002172 mrto4,LOC106582960 coding upstream 222479 6106190 ~ 6108484 (-)
AMCG00002177 NA coding upstream 363555 6247266 ~ 6247869 (-)
AMCG00002178 NA coding upstream 374336 6258047 ~ 6262305 (-)
G121274 NA non-coding downstream 646 5871668 ~ 5874136 (-)
G121271 NA non-coding downstream 13140 5858001 ~ 5861642 (-)
G121188 NA non-coding downstream 646651 5227674 ~ 5228131 (-)
G121152 NA non-coding downstream 737776 5128038 ~ 5137006 (-)
G121151 lrrc38,lrrc38b,LOC107691331,LOC107568719,LOC107555684,LOC108281009,LOC107685631 non-coding downstream 758765 5110602 ~ 5116017 (-)
G121288 NA non-coding upstream 49947 5933658 ~ 5937833 (-)
G121384 NA non-coding upstream 326874 6210585 ~ 6213660 (-)
G121403 NA non-coding upstream 393757 6277468 ~ 6277902 (-)
G121443 rpl22,LOC107737574,LOC107703077,LOC103047485,LOC107593380,LOC108414460 non-coding upstream 498722 6382433 ~ 6385919 (-)
G121444 NA non-coding upstream 523994 6407705 ~ 6407915 (-)
G120993 NA other downstream 1654905 4214715 ~ 4219877 (-)
G120927 slc45a1,LOC107756616,LOC106565711,LOC107702000 other downstream 2088238 3784236 ~ 3786544 (-)
G120907 NA other downstream 2158530 3713867 ~ 3716252 (-)
AMCG00002097 NA other downstream 2408321 3407485 ~ 3466461 (-)
AMCG00002091 LOC103354943,LOC102299287,LOC101482394,LOC108441428 other downstream 2688429 3173505 ~ 3186353 (-)
AMCG00002167 NA other upstream 92014 5975725 ~ 6015393 (-)
AMCG00002223 NA other upstream 1942930 7826641 ~ 7839411 (-)
AMCG00002265 NA other upstream 3725039 9608750 ~ 9620127 (-)
AMCG00002275 ube4b,LOC107681967,LOC107570768 other upstream 3873714 9757425 ~ 9801108 (-)
AMCG00002276 NA other upstream 3946808 9830519 ~ 9833224 (-)

Expression


Co-expression Network