AMCG00002173 (megf6)


Basic Information

Item Value
gene id AMCG00002173
gene name megf6
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 6033844 ~ 6085952 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002173
ATGGAGCTGAAGGTCGCGACTGTCCTTGTGTTTCTAATAAACGGATTTGTCTCCGCATCCCAGTATGGAGGGGATCTCCAGCCCTACATGCCGAATGTGTGCGCCGAGAAGGAGCTGACGATGGTGGGACACAGACAGCCATGTGTGCAGGCGTTCACACGCATGGTCAAGGTGTGGAAGCAGGGCTGTGCGGGCCAGCAGTGGTGCATGGGCTATGAGAGAAGgACTGCCTATTACACGGCCTACAGACAGGTGTACAGGAAGGACTATCAGACGGTGTACAAGTGCTGTCCTGGGTGGTCCCAGCTCAACGGGGAGGCCGGCTGCCTGTATCCCCCAGAGCGGCCACCAGTTTACCCAGCTGGTGTGCTGGTGGTGATGGGTACCACGCAGGGAAAGCACACAGGAGCCAGGCCTGAGATTAAAGGCTGgcaggggCGCGGCCAGCCCGGCCAGCGTGCTCTGGCGGTTGCCTTGTCTTCTCCACGGCCGcTGTTTGCAGTTACGGGGTCTGCTTCAACGGGGGCCAGTGTGTCGAGGGCTCCTCACAGCTCTGCCACTGTCCGGCAGGATTTAATGGGGCTAGCTGCCAGTATGTGGTCAGTGGTCACAGTAGCCCCGTGGCAGTGGGTGGAGTATGGGCGGTATAAGAATCTCTTCATGGCCAGTGCCCTTGGATCCGGTCCGTATCTAATACGTCTTAGTTCCAAAGCTGAGTTTCACGGAGGCCCTAACGGctggagaggaaggagagaggagagatatTGGTACGGCTCAGCCAGGCTGGGGACACGGGGGGCGAGGTCAGAACTGGCCTTCACAACCAATCAGCTGCAACCTCAAGTGCTGAGACGCGTGAGGGTCAGCACGCTCCTGGGTCCCTCGGGGCCCATGGGACCTCGGGCGCAGGAGCCTCCCAAACTCTGA

Function

symbol description
megf6 Predicted to enable calcium ion binding activity.

NR:

description
PREDICTED: multiple epidermal growth factor-like domains protein 6 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002173 True 927 mRNA 0.60 10 6033844 6085952

Neighbor

gene id symbol gene type direction distance location
AMCG00002164 LOC107385009 coding downstream 130771 5888490 ~ 5903073 (-)
AMCG00002166 NA coding downstream 150133 5874782 ~ 5883711 (-)
AMCG00002157 LOC106565901,LOC108438575,LOC104956748,LOC102783840,LOC107751159 coding downstream 206319 5804842 ~ 5827525 (-)
AMCG00002158 NA coding downstream 247812 5760834 ~ 5786032 (-)
AMCG00002155 igsf21,LOC108438574 coding downstream 747062 5264007 ~ 5286782 (-)
AMCG00002172 mrto4,LOC106582960 coding upstream 20238 6106190 ~ 6108484 (-)
AMCG00002177 NA coding upstream 161314 6247266 ~ 6247869 (-)
AMCG00002178 NA coding upstream 172095 6258047 ~ 6262305 (-)
AMCG00002185 rnf207b,LOC108434591,LOC107593377,LOC107712689,LOC106572244 coding upstream 271705 6357657 ~ 6381431 (-)
AMCG00002187 NA coding upstream 342413 6428365 ~ 6447619 (-)
G121288 NA non-coding downstream 96011 5933658 ~ 5937833 (-)
G121274 NA non-coding downstream 159708 5871668 ~ 5874136 (-)
G121271 NA non-coding downstream 172202 5858001 ~ 5861642 (-)
G121188 NA non-coding downstream 805713 5227674 ~ 5228131 (-)
G121152 NA non-coding downstream 896838 5128038 ~ 5137006 (-)
G121384 NA non-coding upstream 124633 6210585 ~ 6213660 (-)
G121403 NA non-coding upstream 191516 6277468 ~ 6277902 (-)
G121443 rpl22,LOC107737574,LOC107703077,LOC103047485,LOC107593380,LOC108414460 non-coding upstream 296481 6382433 ~ 6385919 (-)
G121444 NA non-coding upstream 321753 6407705 ~ 6407915 (-)
G121445 chd5,LOC107737210,LOC107691315 non-coding upstream 327061 6413013 ~ 6413274 (-)
AMCG00002167 NA other downstream 18451 5975725 ~ 6015393 (-)
G120993 NA other downstream 1813967 4214715 ~ 4219877 (-)
G120927 slc45a1,LOC107756616,LOC106565711,LOC107702000 other downstream 2247300 3784236 ~ 3786544 (-)
G120907 NA other downstream 2317592 3713867 ~ 3716252 (-)
AMCG00002097 NA other downstream 2567383 3407485 ~ 3466461 (-)
AMCG00002223 NA other upstream 1740689 7826641 ~ 7839411 (-)
AMCG00002265 NA other upstream 3522798 9608750 ~ 9620127 (-)
AMCG00002275 ube4b,LOC107681967,LOC107570768 other upstream 3671473 9757425 ~ 9801108 (-)
AMCG00002276 NA other upstream 3744567 9830519 ~ 9833224 (-)
AMCG00002279 NA other upstream 3750966 9836918 ~ 9853075 (-)

Expression


Co-expression Network