AMCG00002189 (acot7,LOC107754737,LOC107693425)


Basic Information

Item Value
gene id AMCG00002189
gene name acot7,LOC107754737,LOC107693425
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 6537081 ~ 6553474 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002189
ATGAAGTGCGTCGCCGACACAGAGCCCATCTCCATCGCTCTCCGCTCCGCCGCAGACAGCAGCCCCTGGCAGGGTGGCGGGACTGTAAATGAAAAGCGCGTCTCGGTTCTCCCTGCCTCGGTTTCACGGTTTCCCTTCACAGTgaTCATGCGTCCTGATGATGCCAACATCGTGGGCAACGTCCACGGGGGCACCATCCTGAAAATGATCGAGGAAGCCGGGGGCATCATCAGCACTCGGCACTGCAACACCCAGTCTGGGGATCGCTGTGTGGCTGCCCTGGCCCGCGTGGAGCGCACCGACTTCCTGCACCCCATGTTCATCGGAGAGGTGGCCCACGTGAGCGCGGAGATCACCTACACCTCCAAGCACTCGGTGGAGGTCCAGGTCATCGTGCTGGCCGAGAACATCCTCACAGGGGCcaaaaaagtaacaaacaaGGCCACACTGTGGTATGTCCCTTTCTCCCTGCAAAACGTCGACAAAATCATCGAGGTCCCTGTGATCGAGTACTCAAGCgtggagcaggaggaggagggcaaGAAGCGATACGACGCCCAGAAGATGGAGAGGCTGGAGACCAAGGAGAGGAACGGGGAGATCATCAACCCTGTGGTCAGCCCAGAGGCCTACACCGTGGGGTTCAGCCAATCCAGCCTCATCCACCTCGTGGGGCCGTCGGACTGCACTCTGCATGGATTTGTACACGGA

Function

symbol description
acot7 Predicted to enable long-chain fatty acyl-CoA binding activity and palmitoyl-CoA hydrolase activity. Predicted to be involved in acyl-CoA metabolic process and palmitic acid biosynthetic process. Predicted to be active in cytosol and nucleoplasm. Orthologous to human ACOT7 (acyl-CoA thioesterase 7).

NR:

description
PREDICTED: cytosolic acyl coenzyme A thioester hydrolase

GO: NA

KEGG:

id description
K17360 ACOT7; acyl-coenzyme A thioesterase 7

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002189 True 711 mRNA 0.60 6 6537081 6553474

Neighbor

gene id symbol gene type direction distance location
AMCG00002188 NA coding upstream 14857 6520509 ~ 6522224 (+)
AMCG00002186 chd5,LOC102784485 coding upstream 112818 6402910 ~ 6424263 (+)
AMCG00002182 rpl22,LOC107737211,LOC107593380,LOC102779685,LOC103047485,LOC108414460 coding upstream 151299 6383055 ~ 6385782 (+)
AMCG00002179 icmt,LOC107737573 coding upstream 176437 6356405 ~ 6360644 (+)
AMCG00002181 NA coding upstream 191881 6326884 ~ 6345200 (+)
AMCG00002192 gpr153 coding downstream 82460 6635934 ~ 6655887 (+)
AMCG00002194 NA coding downstream 160633 6714107 ~ 6725801 (+)
AMCG00002195 wrap73,LOC107748967,LOC107595759 coding downstream 220449 6773923 ~ 6785974 (+)
AMCG00002202 LOC107595762,LOC107602448,LOC107735586 coding downstream 557303 7110777 ~ 7119186 (+)
AMCG00002203 LOC106926566,LOC107691064 coding downstream 567105 7120579 ~ 7128460 (+)
G121417 NA non-coding upstream 209600 6327197 ~ 6327481 (+)
G121402 NA non-coding upstream 259181 6277518 ~ 6277900 (+)
G121228 NA non-coding upstream 966834 5474136 ~ 5570247 (+)
G121198 NA non-coding upstream 1261158 5243709 ~ 5275923 (+)
G121187 NA non-coding upstream 1308982 5227674 ~ 5228099 (+)
G121526 NA non-coding downstream 239502 6792976 ~ 6798043 (+)
G121680 NA non-coding downstream 1007592 7561066 ~ 7562732 (+)
G121688 ski,LOC106572818 non-coding downstream 1093244 7646718 ~ 7648316 (+)
G121722 NA non-coding downstream 1276333 7829807 ~ 7834211 (+)
G121741 NA non-coding downstream 1357084 7910558 ~ 7917243 (+)
AMCG00002152 NA other upstream 1310425 5218830 ~ 5226656 (+)
AMCG00002098 NA other upstream 2994904 3533814 ~ 3542177 (+)
G120742 NA other upstream 3577606 2956908 ~ 2959475 (+)
AMCG00002076 NA other upstream 3682954 2852154 ~ 2854127 (+)
G120518 NA other upstream 4596265 1924022 ~ 1940816 (+)
AMCG00002190 acot7 other downstream 33180 6586654 ~ 6602608 (+)
AMCG00002215 NA other downstream 840326 7393800 ~ 7411230 (+)
AMCG00002245 NA other downstream 2185297 8738771 ~ 8792478 (+)
AMCG00002272 NA other downstream 3290731 9844205 ~ 9851312 (+)
AMCG00002294 rere other downstream 4014438 10567912 ~ 10604839 (+)

Expression


Co-expression Network