AMCG00002191 (espn)


Basic Information

Item Value
gene id AMCG00002191
gene name espn
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 6451274 ~ 6500272 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002191
CAACAAGTCCGTTTAGCCACCCGAGGCAGCCGGAGCTAACAGAGCCAAAGGGAGGGATTGTCGTGCCCTAATACAGCAAGAGTGGAAGAAAGAAAGGACCTCTGGCGTAGCCGTTGTTTGCATCCAGTAGAAATCTTGTGAAATACCTGCTATCGAAGGAGAACCCCTTTCCAGAGACATGCCTGCTGGCCGGGATGGCACAGTGTCGGCTGCGCAGCGCCCGGGCGCGGTGTGTGGCAGGGACGGTGCCTGTGGTTGCTGAAGGGCCACTCggcggagagagggagcagcCAGCTGTCGTTTCCCTTCagttttccttcagttttgctCTGCGTCTTGCAGATTCAGGGTGATCACATTCACAATTCTGCTCGGATGCGTCTTGTTATGATGTCTGTGCGTCATGTGTCAAAGCTTTGATTCCCAAactgttttatcatttaaaatattaatccgTATTGTCAGCAGTAGTTTCTGGAGTGAGGATATTACAATGTTGCAGTCTAAgccaatgcatttttatagttaaataaaaatgaataaaggtaCATGAGATTAGACTTGtcatacaaaaaagaaagatctGACCTGCAGAGTTgggtttatttacaatacaacTCCATTTATATTTGACACCAGCCCTGTTTATTGATGTCGCACTGTAACACATACCGGTGCATGTAAAGAAGAGGTGAAAGCAGTTAGCATGGTGGTGGAGAGGGCTCTGCTGGCCGCAAGGCAGGGGGACGTGCAAACCCTGAAGGCGCTGCTGGCGGAGAAGGTGTTGGATGCCGGCGTGAAGGACCCGCTGGGCGCCTCTCCCATCCACCACGCCGCCCGGGCTGGCAAGCTCAGCTGCCTGCGGTACCTGGTGGAGGATGCGGGGCTGCCGGGGAACTGTCTCGCCAGGAACGGTGCCAGCCCCGCACACGACGCCGCCGCCACGGGCAacctggcctgcctgcagtggCTGCTCACGCAAGGAGGTTGTCGGTCAGCgGACCGGGACAGCTCGGGGGCTACAGTTCTGCACCTTGCAGCTCGCTTCGGCCACCACGACATCACAGACTGGCTCCTCAAGAGCGGGGAGGGAGACCCCACCGTATCCACAGACACGGGAGCTCTGCCCGTCCACTATGCAGCGGCCAAAGGAGACCTCCCCTCGCTACGACTGCTCCTGGGACACACCCCGAGTGTTGTCAATGCCCAAACAAAGAATGGTGCCACACCCCTTTACCTGGCTTGTCAAGAGGGCCACTTGGAGGCCATCCAATACCTGGTGAAGGACTGCGGGGCGCAGCCTCGAATTCGAGCCAATGACGGGATGACACCTCTGCACGCCGCCGCCCAGATGGGACACAATACTGTCATTGTCTGGCTGATGAGCTTCACAGACATCAGCCTGACAGACCGGGACAATGACGGTGCCACTGCCATGCACTTTGCGGCCAGTCGTGGCCACGCCAAGGTCCTGAGCTGGCTGCTGCTTCACGGAGGAGAGATCAGCAACGACAGCTGGGGAGGGACCCCCCTGCACGACGCCGCCGAGAACGGGGAGCTGGAGTGTTGTCAGATCCTGGTGGTAAACGGAGTGGACCTGGGCATCAAAGACCAGGACGGCTACTCTGCGGCAGACCTGGCCGAGTACAACGGCTACCCCCAGTGTGCCAAGTACCTGCGCACTGTGGAGAACATGAGCGTGGAGCACCGTGTCCTCTCCCGGGACCCCTCGGCTGACCTGGAGTACAAGCAGCCGGACTCGGGCCTCTCCTCCCCCAACACCACCCTCTCCTCCGCCCAGCCGGCGCGCTTCGACATGGGCTCCCCCTCTAGCACCCTCTCCAACTATGATTCCTGCAGCTCCAGCCAGTCCAGCACCGGGGAGAAGAGGAGCGGGGCCCCCCCAGGCCGCAACCCCCCAGGGCAATCCGAGACGGCCATCACAGACATGCAGACCTACATGGACATGCTGAACCCCGACCTAAGCGCCGGAGCCCCGAAGAAGGAGGTGCTGAATCCCAGAGCCCCTCCCCCCCCGCCGGACTTCCCTCCCCCGCCACCGCCGCCTCCCCCGCCCGCCACGGCCCCCGCGCCGCCCCCGTCGCCGCCCAGCTACCCTGCGCCCAACCCCCCCGACGACCAGCCCTCCGCCGAGATCTACCTGAAGGTGAAGAGCAATCTGCGGCACGTGGAGAACGAGGCCCTGAAGACGGAGCTGACGCCAGGAGACGGCACCCCCGAAAGACTGCGCCGGGTCGACTCCAATAGGAAATCCCGTAACTTCAACAAGCAGCCCAGCACCGGGGATTACTACAAGGCCCTGGGCAGCGACACGGCCGACCAACGCGGGAGCAAAGTCATGGCGCCCAACGAGGAGGTACGGGAGCTGCGGCGGGGGTCCGCGGGTTCCCTGTTGTTGGAGGAGCCAGCGGACAGCCAGCAGAACAGAGCTGCCCAAGAgatgccccccccacctcctcctccgcctctccccgagaGCCAGTCCAcccctccgcctcctcctcccctgcCCTCCGACAGCTCGGCGCCCCAGTACAACATGACCCAGCGCCGGCCGTCCTCCTCCTCCGGAAGTGCAAAGTCGTTCAACATGATGTCCCCAACTGGCGACAATTCGGAACTGCTGGCGGAAATCAAAGCAGGGAAGAGTCTGAAACCAACGCCGCAGAGTAAAGGCTATACAACAGTCTTCTCCAACACCGGGGGGAACAACGCCGAGACCCCGTCATCTCCTCCCCCGACTCCGTCCACGCCCTCCACGGAGCCTTCCTCTCCCAACCCCGCAGCCCCGCCCGGCTCGGCCGCTTCCCCCAGGTCCGACTCCCCCTCCATGCCGGCCCAGGGAGCCGGCGTGGGCTTGGAGTACGCGACCTCCCCGGTGATGAACGGCAACGCGGAGTCCCGGCCCCGACAGGCCAGCCTGGTGGACGTGGAGACGCTGGTGCCCACCCACGACGAGCAGGGCAGGGCCATCCCCGAGTGGAAGAGGCAGGTGATGGTGCGCAAGCTGCAGATGAAGAtgcaggaagaggaggagaacaAGCGCAAGgtggaagaggaggaggcgCGGCTGGCGTCCATGCCTGCCTGGAGGAGAGAGATCATGAAGAAgaagctggaggaggagaaACAAGACGAGGAGCGGatgaagaaagagaaggaggaggaggagaagaccGAGCTGGAGAAGCTACGGACCCTCGGGTACGACGAGACCAAGCTGGCGCCGTGGCAGAGGCAGATCATCTTGAAGAAAGGAGACATCGCGAAACACTAgagccccctcctcccctctctctctctctctctctctcccacctccACTCCACACCGCTACACCAGCACCGCCCGGCCCCTTCTCTCCTGGGCAGGATCGGGGGTGGGAATCCACTTTCCGTACCCTGGCGAGGACTGTAGCTTGATAATCTGAACTGTGAGGGTCTGTGCCGTGTCTTTCGCGGCTTCGCAAGCACCCCCAGCTGAGCACCTGCACACACCGGGGACAGAAACGCCCTTGGCTCAGCGTTGCCCTCCACAGTGCGATCTCTCCATGTCCGTTTACTGCGTGTCGTTGAGTCAGTGCTATACGAAAGCCCTGTAGCGTCTCACTCTGTGTAGGCAAAAGACCTGCttcctaaataaaatgtttccaatTAAAGCAAGAGAACATGTTTGTCCAGTTTCCCTTCAGCCGGGGGAGATGCACTTCTCAGTACTGCTACGTTCATTAACCCGAAGGTGATGCAAATACAGAgctggaattaaatcaaaacgcTGACCCATCCCCGCCAACAGGAAACGACAAACCTGTGCTCAGTGGCGCGGCTTCAATCACCgtcagatttttctttcttctactgGTACACCGGGTGCGGTTAGGGTGGGtcaaagtgttgatttaatcGGGCCCCTAGTCAATTTGAAACCGCTGTCCTCCCCATGGAGAGCAATAGTTTTCTATTCAGGACCGAGTTTGGAAGGAGCTTTGATTGAGTAACCAAATCAAAAGTTAACATCATAAAGAAGAGATTGGAAATCAggatgattgttgttgttgttgtttgtcataGTTGTTTGTTTAGGATGTGGCCCTTGCTGACATATGCtcctgaatatatataatataatctacaTACACACTATAAAGGCTATATATACACTATTGTCAAGGAGAACTGCAATGCAATATAATAAAcagagtatttattttagtaaatcaTTATATATGTTGAATTTGGAACATGACAGAGAAGCTGTCTTGCATTCTAGAGTCTGTATTTTGCCACGAAGGTAGTGGAATTACCCCTGAGATCCGTGTAGCCCTTTGGTCAAGTGTACAGAAGGTTATCTCCTAATGCAAACCTTATCCCTACCTttcttcagtcttttttttaagcctGCTTTCCACAAGCTTCAGACTAGTTAGCATGTCGAGATGCACTGAATCTTGGCAAGCAGTGCACTTGCGGGTTCAGCTCAAATCGAATTCGCTGAAAACATGACAGATTTCATTTACGGAAAGCAGTTACAGGTAAAGACTAATTATATGGAATCATTAGcagattttttaatatatctggATGCAACGTGATTaacttttttaatcttttgattACTGGAAACAAAATGATTGTAACAGACTGCACTATTTCAAACACAGAATTCTGCTCGGTTCTGTCTCTTTATTAGGAAGAAAACAACTGTTTCTGAAGAGAATCCAGATATAGTCTTTCAGTCTTATGAAGCAAGGCAACGTCTGAATATGTCATTAAGAAGACGGGGCCCAAGTTGATTTGGATTACAGCAGGAAGTAATATTTCTATAAAGGCTTTTTCTTGGCTACCACAGGAATCAGCATTTAAGAATCCATTAACCTATATGATCTTTGTGTTCAGTCTGCGTTAAAGTACATGTGTTGTGGTCATAAACGTGATAAAATGGTTTTGGGTAAATTCAGCATCTGCATcaaatctaaattaatatttggttACAGAGGTCAACCAGACTTCTCCAGCAGCAAAAAGGCTGAACTAATGGTGTCCTTCTGTCTTTCAACATTTGTCTGGTCAAAATGTATCAAAGTAACACATGCCTATTATCTTGGGTGAATGAAAACCACGATCCGGATGCAAATGTATCCATCCTTTGTGATTCGTGCACCAGATTTGGATTCATTCATGCCAGGGTTTCACATATCGGTGTCTCGAGCCCTCCTTGATCTGCTGGGGACCGTACTGCTGTGGAGAGGCGCTGTGGCACTCAAAAGAGACGCATGTACAGAAATCTGGTTCCATTTTTCATCTCTGTTTTGGAgtatttttcttacatttttttaattattattattattgttattattattatttagaccAATAACCTGTGGATTTAGCACCTGCTGTCTAGATGCTGTAACCGATCTCCCACTCCCCAGAAGTGAGCCGGATGCGTGTTTCTGAATGTTGTATATCTGGGCTGCTTTTCCTGTGTACTGGCACTAGTGCATTTGCATACTCGACGTGCTTTTGGATGtacatttttgcaaataaaagattatatataaatatataagtatgtgAGAAGAGTgcatggggggggggaagagatgTTTCCTAGTTCAGTAAACATTTGGGAACAATTTAATTCACTTCATTGGATGCCATATTGATGTTGAAAAAGAGGAAGTAAAACAAGTTGTATAACATCATTGCCATTAGCAAATTTtctattcatatatatataaatctatatatatttagattggAACCCTAAACTCATTGTCATTtgtctttatttcctttattatatattttttttcagcctTGCTTATGTAGC

Function

symbol description
espn Predicted to enable actin filament binding activity. Acts upstream of or within cell projection morphogenesis. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness 36. Orthologous to human ESPN (espin).

NR:

description
PREDICTED: espin isoform X7

GO: NA

KEGG:

id description
K24047 ESPN; espin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002191 True 5853 mRNA 0.52 13 6451274 6500272

Neighbor

gene id symbol gene type direction distance location
AMCG00002187 NA coding downstream 3655 6428365 ~ 6447619 (-)
AMCG00002185 rnf207b,LOC108434591,LOC107593377,LOC107712689,LOC106572244 coding downstream 69843 6357657 ~ 6381431 (-)
AMCG00002178 NA coding downstream 188969 6258047 ~ 6262305 (-)
AMCG00002177 NA coding downstream 203405 6247266 ~ 6247869 (-)
AMCG00002172 mrto4,LOC106582960 coding downstream 342790 6106190 ~ 6108484 (-)
AMCG00002193 NA coding upstream 165842 6666114 ~ 6667451 (-)
AMCG00002198 NA coding upstream 182760 6683032 ~ 6706524 (-)
AMCG00002196 NA coding upstream 212725 6712997 ~ 6713197 (-)
AMCG00002197 NA coding upstream 229362 6729634 ~ 6735812 (-)
AMCG00002199 tprg1l coding upstream 285855 6786127 ~ 6792271 (-)
G121447 NA non-coding downstream 26976 6420041 ~ 6424298 (-)
G121445 chd5,LOC107737210,LOC107691315 non-coding downstream 38000 6413013 ~ 6413274 (-)
G121444 NA non-coding downstream 43359 6407705 ~ 6407915 (-)
G121443 rpl22,LOC107737574,LOC107703077,LOC103047485,LOC107593380,LOC108414460 non-coding downstream 65355 6382433 ~ 6385919 (-)
G121403 NA non-coding downstream 173372 6277468 ~ 6277902 (-)
G121689 NA non-coding upstream 1060805 7561077 ~ 7562747 (-)
G121716 NA non-coding upstream 1157560 7657832 ~ 7658851 (-)
G121718 NA non-coding upstream 1162714 7662986 ~ 7663677 (-)
G121754 NA non-coding upstream 1329921 7830193 ~ 7845316 (-)
G121789 NA non-coding upstream 1515792 8016064 ~ 8017075 (-)
AMCG00002167 NA other downstream 435881 5975725 ~ 6015393 (-)
G120993 NA other downstream 2231397 4214715 ~ 4219877 (-)
G120927 slc45a1,LOC107756616,LOC106565711,LOC107702000 other downstream 2664730 3784236 ~ 3786544 (-)
G120907 NA other downstream 2735022 3713867 ~ 3716252 (-)
AMCG00002097 NA other downstream 2984813 3407485 ~ 3466461 (-)
AMCG00002223 NA other upstream 1326369 7826641 ~ 7839411 (-)
AMCG00002265 NA other upstream 3108478 9608750 ~ 9620127 (-)
AMCG00002275 ube4b,LOC107681967,LOC107570768 other upstream 3257153 9757425 ~ 9801108 (-)
AMCG00002276 NA other upstream 3330247 9830519 ~ 9833224 (-)
AMCG00002279 NA other upstream 3336646 9836918 ~ 9853075 (-)

Expression


Co-expression Network