AMCG00002193


Basic Information

Item Value
gene id AMCG00002193
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 6666114 ~ 6667451 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002193
ATGGTAGCAGCATCCGAATCTCCAGAAAAGATCCATCTATTAAATGGGAAAAAGGTTTCCAAACCTttgatggaaaagaaaagaagagccAGAATCAACGAGTGTCTGGAGCAGCTGAAAGCACTCCTGGAAAACTATTACACCAATAATATTCGAAAGCGCAAACTGGAGAAAGCTGACATTTTGGAATTGACAGTGAAACATCTACGGAATCTGCAGAAATACccacaggGTGCTTCTGTGAAGACCATACAGTTTGCCGAGTACCAAGCAGGGTTCAAGAATTGCTTGAACGGGGTGAACCACTATCTCATGACACACAAGTCCAACAGGAGAATTAGCTCCAGCCTGTTGAGACACTTCAGCAGCAACTCCAGGGCAGCGGCCGGTTCCAGCACCGCGGACAGCGACCCTGGAGCCGCGCAGACTCGGGAGTGTCCGCCGCTCTGCTTCTCACCAAACCCCGCGCCCAACTCCTCCATACCCGCCTGCGGTGCCCTTACAGCTGGGGCTCAACCCGGGCAGCACCACCGCCCCGCCAGACCAGCAGGCCACGTCAAATGTcagctgtttttaaaagacaaatgccCGGGTAACGAGGCGCAAAGCCACCAAAACAGCGCCACCGCCAGTGCGCACTTTTGTGTCGCGTCGCGGAGTTATTGGCGTCCTTGGTGA

Function

GO: NA

KEGG:

id description
K09088 HES3; hairy and enhancer of split 3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002193 True 678 mRNA 0.53 4 6666114 6667451

Neighbor

gene id symbol gene type direction distance location
AMCG00002191 espn coding downstream 165842 6451274 ~ 6500272 (-)
AMCG00002187 NA coding downstream 218495 6428365 ~ 6447619 (-)
AMCG00002185 rnf207b,LOC108434591,LOC107593377,LOC107712689,LOC106572244 coding downstream 284683 6357657 ~ 6381431 (-)
AMCG00002178 NA coding downstream 403809 6258047 ~ 6262305 (-)
AMCG00002177 NA coding downstream 418245 6247266 ~ 6247869 (-)
AMCG00002198 NA coding upstream 15581 6683032 ~ 6706524 (-)
AMCG00002196 NA coding upstream 45546 6712997 ~ 6713197 (-)
AMCG00002197 NA coding upstream 62183 6729634 ~ 6735812 (-)
AMCG00002199 tprg1l coding upstream 118676 6786127 ~ 6792271 (-)
AMCG00002200 NA coding upstream 130436 6797887 ~ 6824699 (-)
G121447 NA non-coding downstream 241816 6420041 ~ 6424298 (-)
G121445 chd5,LOC107737210,LOC107691315 non-coding downstream 252840 6413013 ~ 6413274 (-)
G121444 NA non-coding downstream 258199 6407705 ~ 6407915 (-)
G121443 rpl22,LOC107737574,LOC107703077,LOC103047485,LOC107593380,LOC108414460 non-coding downstream 280195 6382433 ~ 6385919 (-)
G121403 NA non-coding downstream 388212 6277468 ~ 6277902 (-)
G121689 NA non-coding upstream 893626 7561077 ~ 7562747 (-)
G121716 NA non-coding upstream 990381 7657832 ~ 7658851 (-)
G121718 NA non-coding upstream 995535 7662986 ~ 7663677 (-)
G121754 NA non-coding upstream 1162742 7830193 ~ 7845316 (-)
G121789 NA non-coding upstream 1348613 8016064 ~ 8017075 (-)
AMCG00002167 NA other downstream 650721 5975725 ~ 6015393 (-)
G120993 NA other downstream 2446237 4214715 ~ 4219877 (-)
G120927 slc45a1,LOC107756616,LOC106565711,LOC107702000 other downstream 2879570 3784236 ~ 3786544 (-)
G120907 NA other downstream 2949862 3713867 ~ 3716252 (-)
AMCG00002097 NA other downstream 3199653 3407485 ~ 3466461 (-)
AMCG00002223 NA other upstream 1159190 7826641 ~ 7839411 (-)
AMCG00002265 NA other upstream 2941299 9608750 ~ 9620127 (-)
AMCG00002275 ube4b,LOC107681967,LOC107570768 other upstream 3089974 9757425 ~ 9801108 (-)
AMCG00002276 NA other upstream 3163068 9830519 ~ 9833224 (-)
AMCG00002279 NA other upstream 3169467 9836918 ~ 9853075 (-)

Expression


Co-expression Network