AMCG00002194


Basic Information

Item Value
gene id AMCG00002194
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 6714107 ~ 6725801 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002194
GTGATGCCAAGATTAGGAATGGGTTTGTGCGTCCCACCCTGGGAGTTAGACAAGAGGTAGTAAATCAgttcctctgtgtgtgtatttgagtTGTTCATCAGATCCGGAGGGAGGACATAAGGGGAGGGGACTTTACAGTACATTATGGAAAGCAAAGGTTTGTCTTAGAGGGAGGGATAGGATTTAGCAAGGTAGCTGTAGAAACATTAGGATAGAGAAAGACGCAATTGTCGCATTTACTATCGGATACTATAATTCTGCTACGAGGCTTGCAAGGAGCGGGTGGATTTACCCCCAGACACTTAAAAACGTAAATAAACTGATGCAACcgatgtttatttaattctttcTCAAGAAGACTTATTTTGCTTAGGTTGCAGGGTAATATTTACGCCACAGAACAAAGGCAAAGTGAACAAAGCGAGTGCCACAAAGCCGAAAGAAGTGAGCGATGCAAGAACCAGAGGCATGCCCTGAAGGAGACAGAGGAAGGTCCGCACTATAATAAACTGCCACCGTTTGCGGCAAGAGTCAGAAACGGAAATGCAACGACGAAAAAGGGAGTTTTTGCAAATACAGAGGCAACACCATGCAAGGAAACCCGCCGAAGACAGCGAGCCGGGATGGTGGTGCAGATGAAGTGAAAGTGCAGCCCGATTGAACTGTTGCGCGCAGAGAGGGTCGCTACAGGCGTTATTAGCGCAAAACAATGCGAGACACAGACAGCGGAAGGAAATGACAAACAATGACAGCCCCGCAATAGTAACTTTTTACAGACTTGATCGGCCCCGAAGACCATTTTAATAAGGGACTGCCTGGCACATACGTAGGACGGGAGATCGCATTATTTGAGACTGGATCCTCCAAATGACAGCTCTGAAGTCGCTTTCTTGATTTTTCTTTCGTTTCGACTCCTCTGCAGCTGAAAAGGCAACCAAACACAGTGCAGGGGCGACTGGGATGCGCTAGTGGGTCATTGCTACACACGCAGAGCTGCGTTATTGCAGTGCGGCTGGTTGAACTGTTATTGCACTGGTCTGGCCAtggggaggaagaagaagacCCTGCACGACTACGCCGCGGAGTTCGCCGACCTGGCCGTGAAGAGGCATGTGGTGGAGCAGCACGACTCCGGGGACAGGACCCTGGTGGAGATCCTCTACTGCAAGTCCTGCGAGATCCCCATGAGGGTCCGGCGAGACCGCATACTCGAGCACCTGGCTTCGGCCCGGCACTACCGAAACCGCCGGCTGGCCAAGCAGCAGTGGGACCGGAAACCCACCCTCATATCGCCAACTGATGTCCACCCCACCATACCTGTGAAACTGGACTCTTCCCCCTCCATCGCCTTGCCATCTCCGCTGATCCTGCACGGCAAGCActgctcctcctcttccagCACGGCCGCCCTCCAGTCCCCAGGCTCCCAATATGCACCGTCGGGCCCGGTCCGCTCCTCCGGCATCACCTCCACCTCCAACAGCAGCTCTGCCTCAGCGCAGGGTGACGCCACACCGTCTACCTCCTCCAGCAAGCCTCAGAGCCTCCTGGGCACACGGGTCAAGAGCCCCACGCTGCAGGCCTGGCCCTCCAGTCCCTGGCTGGTGGTGACGGAGGCGTCTAACAGTGTGCCATCTGGGCGGCACGGCTCCGGAGCTGGGGCACTGGGCAGCCTGGGAGTGGGGCTGGCCCTTTTCGGTGTGGGCTCAGGCAGCAGGGCCCTGTGCCAGTGCCTGGTGGAGGAGAGCGGCTGCCACCTGTTGTACATTGTGGAGGACCAGCGCTGGGAGGTGGAGAGCATCTTCAGCCAAGAACATCTAACCCACACCAGAGTCCTCCGAGCCCTAGACACCGACATTGTGCTCAGTGACCAACGCGTCAGCGGAGTCGTCGTGTGCAGCCCCCCCAACGAGGCCTCCGCTATCGTCCTGGACGCCTTACGAGCAGGTAAAGGGGTGTTTTGTGAGAAGCTGCCTAGTTTAGACAGACACATAGCAGAGTCCTGCTTCGATGAAGCTGACAGACTTggaaaaccactgctgtgtggATTTTACAAGCGTTTTGATCCGGCCCTGCAGTTCTTATACAAGAGGGTCCACGAGAACGACACGCTGGGGAAGATCCAGAGGATATCTGCTGTGAGCCGCCTGTACCCGCGCCCCGCTGTGGCAAAGATCAAATCCTCTGGTGGGATCTTTTATAGCATGGCCGTGCATGACATTGATGTCATCTGCTGGCTTTTAGGAGAGAGCGCTCCAGACACCATCTTCACACTGGGACACGCGTTCTGTGCAGAGATGGCCGCGATGAATGATGCCGACTCCATCTCCATCAGTATGAAATTCCCCAGCGGCACCATGGCCTCCCTCGACGTCAGCCAGCACTGCAACAAGAGCTGCGACCAAAGACTGGAGGTCCACGGCTCAGAGGGCTCTCTGCAGATGGAGAACCGCAATCCTCTGGGAATCTCGGACCACAGCACCTTGGCCGGCCTGTGCCTGCAGGCCACGTCTGACCGCTACAGAGACGCCTACAGGGAGATCCTGCGCCACTTCCTCAGGACACTCAAAGGAAGGGAATCGCCTTTCTTCACCAAAGAGCAGTATTTGTGGACGATCCAGGTGGCGGCGGCGGCCGAGCAGTCGTGGAGGAATGGCTCCGCTGTGGACCTGCGCAACGAGGCCATGGAGAACACGGTCATCAAGACCGAGGTGCCGTGAACGGGCCTGGACTGAGACGAGTGAGCCCAGGGGCGTCTCCCAAACCCCACGGAATTAAGCTGCGGACACGGCCCATATCCATAACTATCGTTTTAAGACGTTAACCATTGATTTTGTTCATGTTTGCAAGATGGTGGGGCATTTGTAATACTACCCTCCGTGTCGCAAATAACCCCCGAAAAGTACTGTTGTGGACCTTGACTTTGGCATTGTGACCATTTCCAGTGGGTTCACGGAATTCATACAGGAGTTTCAAAGTCATGGAAGGTCAATACTTTAACCTACACCATAAATTTCACTCACAGTTTATTTGATATGCTCCCAACATTAGGGATCTGCAATCATTCTTGGCCAAACATGtttctcttgtatttatttgaatttatttattgtgcttaAGGTATTTCACCCCTTGTAGGATTTTTCAAATTagctcaattatttttttaaagaagtatATGGGTCAGTTATGTATTGGCTTAAAATCGATACCTTAAGCATTACACTGCACTGATAAATGTATATAGGACAAAAAGAGCTCAATTTACTGTTAAGACGGATGTTCTAATCTTGAGAACTTAACTTTGAATACTCAGATgccatgtacagtatatataactCCCAACATCCATCAAAAATGTGATATTACCTTCAAAAATATAGCTGTGGACTTGAATAGAAATGAATATTCACAAATGCAATAACTGTGCCTTAAATGCTGGCCCAGATACAATTAAAACTGTCAAATTACAACCCCAGTACTTGACAACTTCTTCCCAGTGgaaggtttgttttaattttgtcagcTCTCGCAACCGATTGAAATCTCTGGTGCCAAAACAGTCCTGTTCTGTTAAGGAGACCgatccaaaatatatatatattatatatatatttcaaaggaCAGTGGACAATGGACAGAGGAAGCCATTAAATGGATGACAAAAGAAGACCATGTAAAAGATGGGAAGACGGactaataaactttgcaggcgtgacatggaaaagagaagctgtggggaggccttcatccagcagtgtatcaatataatatgatgcatatatacatacatgtacacacacacacactatatacatgGTTTTTATTCCTTATATTTCATTGCTtcggtttgtttttatgttctaaaaaataccaaacattttttttttggttttcgtattcttttaataaatttatattgtttacatttGGTGTAAAGACCTTATTTTGGGaagataaaacaacaaatactttTTAGCTTATCTGTTGATTTGTACCCACACTATAACCCCTGCTGATTTCAGACTGAGCTCGCTGGGGTGTCTCCATTACAAGTTACAAACAAGCGAGTTGGGTTACTGGACCTTACAGCTCACAACTGGAAAAATATCCATGGCTGTACCTCTCGGCGAGTGTTTGATCCCTTATCTCCAGTTGGCATTGAGTGTAGCTGTAATTCTGGGATCATATTGCACGTCCTGCAAGCTTCGTAATTACTCTGTTGGCTCAAGTAGCCAGTGTGACATTGCTGGGACCATTAGTGTCATCAGGAGATAGTGCTGAGGGCTGAAGTCTGATATCTGCAGCTGCGACTTATTACTTGGAGTGGCTCTGTTTTTCACATCCATGTGCAGTctgatatttattattcagCACCCAGTGTGGTATATTGTTGCTGTACTTTACTCCTATTTCGTAGAAAGCAGGAACACTCAGCTAGTGCTTCATGTCACCTTAGCGCTGAATTACCCCAAATTACAAACTGCAGCAGTGCACATGTGTGTTTTACATATAAACCCCCATTTCATTAGATATGAACATGAGTCTGAgcttaaaaagtatataaaatggTGAGAACGAGGAGTAAAGGTGACTTAAAATCCTTTTTAAagtcagcatttaaaatatgtttcttaaaCTGGACTGCACAACATACACTCGTGGCAGAGTCCTTATAATTTACTGGTACAATCGGACActttaatggtttgtttttctctctttgccACCTTAAACCCCCCATAtgctttaaaagctttttaattacattaggCAGTCTAGCCTGAGATAATCACTCAAGGATCAGATGCCACTTCTACAGAGATTTCAGGTTGTGGAGGATAATACTTGCCTGCTATTTCATTAAGGAGAATTTGGAGAGTggataggaaaaaaaatactacacaaTCAGTGTGTGTGATGGACCATAGCCACCCTTCCAGACtcagatgtatatattttttaaaattgctAATGGCATAAAATGTGAAGCTGAAATCAAATATCTGTGAATccctatatatatttgtcttttttattttgtattaatatatatgtagtcATAAAAGTGTTGTCtcctgtataaataaaatgttttttgtatttttgaa

Function

GO: NA

KEGG:

id description
K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002194 True 5111 mRNA 0.47 10 6714107 6725801

Neighbor

gene id symbol gene type direction distance location
AMCG00002192 gpr153 coding upstream 58220 6635934 ~ 6655887 (+)
AMCG00002189 acot7,LOC107754737,LOC107693425 coding upstream 160633 6537081 ~ 6553474 (+)
AMCG00002188 NA coding upstream 191883 6520509 ~ 6522224 (+)
AMCG00002186 chd5,LOC102784485 coding upstream 289844 6402910 ~ 6424263 (+)
AMCG00002182 rpl22,LOC107737211,LOC107593380,LOC102779685,LOC103047485,LOC108414460 coding upstream 328325 6383055 ~ 6385782 (+)
AMCG00002195 wrap73,LOC107748967,LOC107595759 coding downstream 48122 6773923 ~ 6785974 (+)
AMCG00002202 LOC107595762,LOC107602448,LOC107735586 coding downstream 384976 7110777 ~ 7119186 (+)
AMCG00002203 LOC106926566,LOC107691064 coding downstream 394778 7120579 ~ 7128460 (+)
AMCG00002204 NA coding downstream 419924 7145725 ~ 7150413 (+)
AMCG00002207 NA coding downstream 426672 7152473 ~ 7153321 (+)
G121417 NA non-coding upstream 386626 6327197 ~ 6327481 (+)
G121402 NA non-coding upstream 436207 6277518 ~ 6277900 (+)
G121228 NA non-coding upstream 1143860 5474136 ~ 5570247 (+)
G121198 NA non-coding upstream 1438184 5243709 ~ 5275923 (+)
G121187 NA non-coding upstream 1486008 5227674 ~ 5228099 (+)
G121526 NA non-coding downstream 67175 6792976 ~ 6798043 (+)
G121680 NA non-coding downstream 835265 7561066 ~ 7562732 (+)
G121688 ski,LOC106572818 non-coding downstream 920917 7646718 ~ 7648316 (+)
G121722 NA non-coding downstream 1104006 7829807 ~ 7834211 (+)
G121741 NA non-coding downstream 1184757 7910558 ~ 7917243 (+)
AMCG00002190 acot7 other upstream 111499 6586654 ~ 6602608 (+)
AMCG00002152 NA other upstream 1487451 5218830 ~ 5226656 (+)
AMCG00002098 NA other upstream 3171930 3533814 ~ 3542177 (+)
G120742 NA other upstream 3754632 2956908 ~ 2959475 (+)
AMCG00002076 NA other upstream 3859980 2852154 ~ 2854127 (+)
AMCG00002215 NA other downstream 667999 7393800 ~ 7411230 (+)
AMCG00002245 NA other downstream 2012970 8738771 ~ 8792478 (+)
AMCG00002272 NA other downstream 3118404 9844205 ~ 9851312 (+)
AMCG00002294 rere other downstream 3842111 10567912 ~ 10604839 (+)
AMCG00002296 NA other downstream 3988998 10714799 ~ 10753893 (+)

Expression


Co-expression Network