AMCG00002196


Basic Information

Item Value
gene id AMCG00002196
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 6712997 ~ 6713197 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002196
ATGCCAACGCGCTATTCTGGCGCAGGCATTGACCCCGCCATCTGCAAGACTGCATTGAAGCTGAAACCCAAGAAGGTGGTGGAGCAGAAGGGCAATTACTTCATGGTGAAAACATTGAGCCCCTTCAGGAACTACACCATTGGTTCCCTTGTGGGCGAGGAGTACACCAAAGGAGAAATATCTCCCCCTCCATTAGAGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002196 True 201 mRNA 0.51 1 6712997 6713197

Neighbor

gene id symbol gene type direction distance location
AMCG00002198 NA coding downstream 6473 6683032 ~ 6706524 (-)
AMCG00002193 NA coding downstream 45546 6666114 ~ 6667451 (-)
AMCG00002191 espn coding downstream 212725 6451274 ~ 6500272 (-)
AMCG00002187 NA coding downstream 265378 6428365 ~ 6447619 (-)
AMCG00002185 rnf207b,LOC108434591,LOC107593377,LOC107712689,LOC106572244 coding downstream 331566 6357657 ~ 6381431 (-)
AMCG00002197 NA coding upstream 16437 6729634 ~ 6735812 (-)
AMCG00002199 tprg1l coding upstream 72930 6786127 ~ 6792271 (-)
AMCG00002200 NA coding upstream 84690 6797887 ~ 6824699 (-)
AMCG00002201 prdm16 coding upstream 210801 6923998 ~ 6939545 (-)
AMCG00002208 mfn2,LOC107748965 coding upstream 362552 7075749 ~ 7086413 (-)
G121447 NA non-coding downstream 288699 6420041 ~ 6424298 (-)
G121445 chd5,LOC107737210,LOC107691315 non-coding downstream 299723 6413013 ~ 6413274 (-)
G121444 NA non-coding downstream 305082 6407705 ~ 6407915 (-)
G121443 rpl22,LOC107737574,LOC107703077,LOC103047485,LOC107593380,LOC108414460 non-coding downstream 327078 6382433 ~ 6385919 (-)
G121403 NA non-coding downstream 435095 6277468 ~ 6277902 (-)
G121689 NA non-coding upstream 847880 7561077 ~ 7562747 (-)
G121716 NA non-coding upstream 944635 7657832 ~ 7658851 (-)
G121718 NA non-coding upstream 949789 7662986 ~ 7663677 (-)
G121754 NA non-coding upstream 1116996 7830193 ~ 7845316 (-)
G121789 NA non-coding upstream 1302867 8016064 ~ 8017075 (-)
AMCG00002167 NA other downstream 697604 5975725 ~ 6015393 (-)
G120993 NA other downstream 2493120 4214715 ~ 4219877 (-)
G120927 slc45a1,LOC107756616,LOC106565711,LOC107702000 other downstream 2926453 3784236 ~ 3786544 (-)
G120907 NA other downstream 2996745 3713867 ~ 3716252 (-)
AMCG00002097 NA other downstream 3246536 3407485 ~ 3466461 (-)
AMCG00002223 NA other upstream 1113444 7826641 ~ 7839411 (-)
AMCG00002265 NA other upstream 2895553 9608750 ~ 9620127 (-)
AMCG00002275 ube4b,LOC107681967,LOC107570768 other upstream 3044228 9757425 ~ 9801108 (-)
AMCG00002276 NA other upstream 3117322 9830519 ~ 9833224 (-)
AMCG00002279 NA other upstream 3123721 9836918 ~ 9853075 (-)

Expression


Co-expression Network