Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00002218 |
| gene name | ski,LOC106572818 |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 7646655 ~ 7647629 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| symbol | description |
|---|---|
| ski | Enables several functions, including DNA-binding transcription repressor activity, RNA polymerase II-specific; enzyme binding activity; and zinc ion binding activity. Involved in several processes, including SMAD protein signal transduction; negative regulation of osteoblast differentiation; and negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway. Acts upstream of or within negative regulation of Schwann cell proliferation. Located in PML body and centrosome. Part of protein-containing complex. |
| description |
|---|
| PREDICTED: ski oncogene |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00002218 | True | 975 | mRNA | 0.58 | 1 | 7646655 | 7647629 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00002219 | ski | coding | downstream | 64557 | 7565399 ~ 7582098 (-) |
| AMCG00002212 | NA | coding | downstream | 433691 | 7210266 ~ 7212964 (-) |
| AMCG00002210 | clcn6 | coding | downstream | 468671 | 7165097 ~ 7177984 (-) |
| AMCG00002209 | NA | coding | downstream | 537474 | 7090840 ~ 7109181 (-) |
| AMCG00002208 | mfn2,LOC107748965 | coding | downstream | 560242 | 7075749 ~ 7086413 (-) |
| AMCG00002221 | prkcz,LOC106572815 | coding | upstream | 44331 | 7691960 ~ 7719401 (-) |
| AMCG00002220 | prkcz | coding | upstream | 149094 | 7796723 ~ 7800503 (-) |
| AMCG00002222 | NA | coding | upstream | 172883 | 7820512 ~ 7826557 (-) |
| AMCG00002225 | NA | coding | upstream | 198709 | 7846338 ~ 7856519 (-) |
| AMCG00002230 | NA | coding | upstream | 223265 | 7870894 ~ 7871496 (-) |
| G121689 | NA | non-coding | downstream | 83908 | 7561077 ~ 7562747 (-) |
| G121447 | NA | non-coding | downstream | 1222357 | 6420041 ~ 6424298 (-) |
| G121445 | chd5,LOC107737210,LOC107691315 | non-coding | downstream | 1233381 | 6413013 ~ 6413274 (-) |
| G121444 | NA | non-coding | downstream | 1238740 | 6407705 ~ 6407915 (-) |
| G121443 | rpl22,LOC107737574,LOC107703077,LOC103047485,LOC107593380,LOC108414460 | non-coding | downstream | 1260736 | 6382433 ~ 6385919 (-) |
| G121716 | NA | non-coding | upstream | 10203 | 7657832 ~ 7658851 (-) |
| G121718 | NA | non-coding | upstream | 15357 | 7662986 ~ 7663677 (-) |
| G121754 | NA | non-coding | upstream | 182564 | 7830193 ~ 7845316 (-) |
| G121789 | NA | non-coding | upstream | 368435 | 8016064 ~ 8017075 (-) |
| G121875 | NA | non-coding | upstream | 1177802 | 8825431 ~ 8859003 (-) |
| AMCG00002167 | NA | other | downstream | 1631262 | 5975725 ~ 6015393 (-) |
| G120993 | NA | other | downstream | 3426778 | 4214715 ~ 4219877 (-) |
| G120927 | slc45a1,LOC107756616,LOC106565711,LOC107702000 | other | downstream | 3860111 | 3784236 ~ 3786544 (-) |
| G120907 | NA | other | downstream | 3930403 | 3713867 ~ 3716252 (-) |
| AMCG00002097 | NA | other | downstream | 4180194 | 3407485 ~ 3466461 (-) |
| AMCG00002223 | NA | other | upstream | 179012 | 7826641 ~ 7839411 (-) |
| AMCG00002265 | NA | other | upstream | 1961121 | 9608750 ~ 9620127 (-) |
| AMCG00002275 | ube4b,LOC107681967,LOC107570768 | other | upstream | 2109796 | 9757425 ~ 9801108 (-) |
| AMCG00002276 | NA | other | upstream | 2182890 | 9830519 ~ 9833224 (-) |
| AMCG00002279 | NA | other | upstream | 2189289 | 9836918 ~ 9853075 (-) |
