Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00002223 |
| gene name | NA |
| gene type | misc |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 7826641 ~ 7839411 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00002223 | False | 501 | mRNA | 0.49 | 4 | 7826641 | 7837116 |
| TU152605 | True | 541 | TUCP | 0.43 | 4 | 7836495 | 7839411 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00002222 | NA | coding | downstream | 84 | 7820512 ~ 7826557 (-) |
| AMCG00002220 | prkcz | coding | downstream | 26138 | 7796723 ~ 7800503 (-) |
| AMCG00002221 | prkcz,LOC106572815 | coding | downstream | 107240 | 7691960 ~ 7719401 (-) |
| AMCG00002218 | ski,LOC106572818 | coding | downstream | 179012 | 7646655 ~ 7647629 (-) |
| AMCG00002219 | ski | coding | downstream | 244543 | 7565399 ~ 7582098 (-) |
| AMCG00002225 | NA | coding | upstream | 6927 | 7846338 ~ 7856519 (-) |
| AMCG00002230 | NA | coding | upstream | 31483 | 7870894 ~ 7871496 (-) |
| AMCG00002228 | NA | coding | upstream | 48901 | 7888312 ~ 7901666 (-) |
| AMCG00002229 | NA | coding | upstream | 67624 | 7907035 ~ 7907578 (-) |
| AMCG00002227 | mad2l2 | coding | upstream | 99049 | 7938460 ~ 7945017 (-) |
| G121718 | NA | non-coding | downstream | 162964 | 7662986 ~ 7663677 (-) |
| G121716 | NA | non-coding | downstream | 167790 | 7657832 ~ 7658851 (-) |
| G121689 | NA | non-coding | downstream | 263894 | 7561077 ~ 7562747 (-) |
| G121447 | NA | non-coding | downstream | 1402343 | 6420041 ~ 6424298 (-) |
| G121445 | chd5,LOC107737210,LOC107691315 | non-coding | downstream | 1413367 | 6413013 ~ 6413274 (-) |
| G121789 | NA | non-coding | upstream | 176653 | 8016064 ~ 8017075 (-) |
| G121875 | NA | non-coding | upstream | 986020 | 8825431 ~ 8859003 (-) |
| G121885 | NA | non-coding | upstream | 1029234 | 8868645 ~ 8870698 (-) |
| G121912 | NA | non-coding | upstream | 1092752 | 8932163 ~ 8933163 (-) |
| G121935 | NA | non-coding | upstream | 1178715 | 9018126 ~ 9018327 (-) |
| AMCG00002167 | NA | other | downstream | 1811248 | 5975725 ~ 6015393 (-) |
| G120993 | NA | other | downstream | 3606764 | 4214715 ~ 4219877 (-) |
| G120927 | slc45a1,LOC107756616,LOC106565711,LOC107702000 | other | downstream | 4040097 | 3784236 ~ 3786544 (-) |
| G120907 | NA | other | downstream | 4110389 | 3713867 ~ 3716252 (-) |
| AMCG00002097 | NA | other | downstream | 4360180 | 3407485 ~ 3466461 (-) |
| AMCG00002265 | NA | other | upstream | 1769339 | 9608750 ~ 9620127 (-) |
| AMCG00002275 | ube4b,LOC107681967,LOC107570768 | other | upstream | 1918014 | 9757425 ~ 9801108 (-) |
| AMCG00002276 | NA | other | upstream | 1991108 | 9830519 ~ 9833224 (-) |
| AMCG00002279 | NA | other | upstream | 1997507 | 9836918 ~ 9853075 (-) |
| AMCG00002288 | NA | other | upstream | 2430478 | 10269889 ~ 10279984 (-) |
