AMCG00002224


Basic Information

Item Value
gene id AMCG00002224
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 7927590 ~ 7937933 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002224
ATGCTGGACCCCTCCAAGATCACAGGAAAACCAGCTGGGTTACCGACAAGCAAAGATCTGCATGAATGTGAGAGTGAGAAGGTTCATTTGCCTTCAATTGAAGACTTGCAGGAGCACTGCCTGCTAATGTTAGGCCATGAAATCTCCCGCCTCTCAGAGTTTGAGGCCGAAAGCTCTAAAAAGGACCACGTGATCACAGCTCTTCAAGAAAAAGTGACGGAACTGATGAATCAGCTGACCCTGGCCCGTAATGAAGACGTTGTTCAAGCGCAGGCAGAACTGATCCTGCGCTTGGGCAATGAAGTGAAACACCTCCGGACCTTTGAAGAAGAGGTATCAAGACAGAAGGAGTTAATTGCAGAACTGAGTGAGGAAATAGCAAGGCTTAATCTCCCAAGACTGCAATGGGAATGTGCAGCCCACACCTCGAAAGAGCTGGAGAATGAGGCAACACAATTTGAAACCCAGCTAGAGACATCTCCGGAAACATGTCCAGCAACATGGCAAGACAGCTCAACCCTGAGTGAGACAGAAACCAGTTCAGAGTTGGAGGGAGTTGGGCAACAGAAGAAAGAACTGGAACACTTTCACGAGAATCTAGTAAAGGAGTTAGAGGAAACCAAACGGAAGTACAAGATGTCTTCTGGCACAGTGTGCATCTTACGGAGATGTTTGTCTGTGAAAGAAGCTGAACTGGTCAAGGCTGGGAACAGGCAGGAAAGACTGAGGAAGGAGCTTACAGACAGGGCGTTACAGCTCCAAGCCATGTCTAAAAAGTTTTCATGTTTAcgagaagggaaaataaatgaagaactGATGGCAGATCTGGAGAATGAGAACTTTACACAGAGAAAGCTCACAGCACGACTGCAGCAGGAGAtagaactgaaaaacaaagcGGTTGCTGAGTTCAAGGCTGAAGTGCACGGGCTGAAGCAGGAGCTGGCTGCACAGAGGGCAGGCATGACTGAGCTGGAGACAGACTTCAGGGAGAATCAGGCCAAAATGGCCAGTCTGCAGAAAATACACAATCAGACCAAGGTGTATCTGGAGCAGCTGCAGGCTCGGTTTGAAAGATTCCGTGGAAAAATTATACAAGCTGCCTACTGTGCTCCCGGAGCCAAATTCCCACTAAATGAGATCAGTGATGTTGAGATTCTTCGTACCATGCAGaaaataattgatgATCGTTCTCAGTTCCACCAGCTGCTCACacaaaaaggagagagaatgCCGCCTCTGTTCATCATGGAGACACAGCTCCCGATGAAAAGCAAGCCAATCTCTCCTAAAAAGAACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002224 True 1302 mRNA 0.47 10 7927590 7937933

Neighbor

gene id symbol gene type direction distance location
AMCG00002217 NA coding upstream 263901 7658258 ~ 7663689 (+)
AMCG00002216 NA coding upstream 536939 7382538 ~ 7390651 (+)
AMCG00002213 plch2,LOC107602463 coding upstream 549150 7325990 ~ 7378440 (+)
AMCG00002214 plch2,LOC107691057,LOC107710777,LOC107748961,LOC107595766 coding upstream 603689 7318975 ~ 7323901 (+)
AMCG00002211 mthfr coding upstream 736475 7178439 ~ 7191115 (+)
AMCG00002232 NA coding downstream 42371 7980304 ~ 8010540 (+)
AMCG00002231 NA coding downstream 78960 8016893 ~ 8022378 (+)
AMCG00002236 NA coding downstream 190264 8128197 ~ 8151854 (+)
AMCG00002235 NA coding downstream 223393 8161326 ~ 8178947 (+)
AMCG00002241 NA coding downstream 868183 8806116 ~ 8809795 (+)
G121741 NA non-coding upstream 10347 7910558 ~ 7917243 (+)
G121722 NA non-coding upstream 93379 7829807 ~ 7834211 (+)
G121688 ski,LOC106572818 non-coding upstream 279274 7646718 ~ 7648316 (+)
G121680 NA non-coding upstream 364858 7561066 ~ 7562732 (+)
G121526 NA non-coding upstream 1129547 6792976 ~ 6798043 (+)
G121767 NA non-coding downstream 7432 7945365 ~ 7953624 (+)
G121862 NA non-coding downstream 878397 8816330 ~ 8816553 (+)
G121981 NA non-coding downstream 1310384 9248317 ~ 9313334 (+)
G121999 NA non-coding downstream 1604682 9542615 ~ 9562591 (+)
G122058 NA non-coding downstream 1687311 9625244 ~ 9626221 (+)
AMCG00002215 NA other upstream 516360 7393800 ~ 7411230 (+)
AMCG00002190 acot7 other upstream 1324982 6586654 ~ 6602608 (+)
AMCG00002152 NA other upstream 2700934 5218830 ~ 5226656 (+)
AMCG00002098 NA other upstream 4385413 3533814 ~ 3542177 (+)
G120742 NA other upstream 4968115 2956908 ~ 2959475 (+)
AMCG00002245 NA other downstream 800838 8738771 ~ 8792478 (+)
AMCG00002272 NA other downstream 1906272 9844205 ~ 9851312 (+)
AMCG00002294 rere other downstream 2629979 10567912 ~ 10604839 (+)
AMCG00002296 NA other downstream 2776866 10714799 ~ 10753893 (+)
AMCG00002310 NA other downstream 3419619 11357552 ~ 11359840 (+)

Expression


Co-expression Network