AMCG00002227 (mad2l2)


Basic Information

Item Value
gene id AMCG00002227
gene name mad2l2
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 7938460 ~ 7945017 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002227
GAAGCCCTCAGTGTCGCCAGCTGAGTGACGTAAAAACTGCGTCATCAGGGCGCGACAGACATTTAGTCAAGGTGGATTCTAAACATACCGATATAGTATTTCgttgaaaactgtaaaatgtaatgtaaaaaggGATCATATTTGTGCGATGGTTATGGCTGTCATCTCTGATGTATTAGTATGCTATCGTGGGCGCTGACTTCACGAGAAAACATGGGATTGTTTGTATGAATCTGAAAATTGCGCGGCATAGTTTTGATCATTCTTAGTGTGCGGTCAGCATGACTACCCTAACCAGACAGGACCTCAATTTCGGACAGgTGGTTGCTGATATCCTGTGTGAATTTTTGGAGGTGGCCATCCACTTAATCCTGTACGTCCGGGAGGTGTATCCTACTGGGATCttccagaaaaggaaaaaatacaatgtaccaGTACAGatgtcATGCCACCCTGaactaaatcaatacatacaggATACTCTACATTGTATAAAACCACTAATTGAGAAGAATGAAGCAGAGAAAGTAGTGGTCGTCATCATGGACAAAGAGCACCACCCAGTGGAgagatttgtatttgaaatttcACAGCCGCCTCTGCTTTCCATTAGCTCTGATACGTTGCTGTCTCATGTGGAGCAGTTGTTGAGAGCTGTCATCCTAAAAATTAGTGTTTGCGATGCAGTACTTGACAACAATCCACCAGGGTGTACATTTACAGTGCTGGTGCACACGAGAGAGGCTGCCACACGAAATATGGAAAAGATTCAGGTTATTAAGGATTTCCCATGGATAGTAGCCGATGAACAGGAAGTGCATATGCGGGAGCCCAGACTCATACCTTTAAAAACCATGACGTCAGATATTGTTAAAATGCAGCTGTATGTAGAGGAACGAGCACACAAGGCATCTTAAACCACATTGGAAATATACAACTTATCAGATGCCATCTAAAATGAAACTGCCTTCCATATGTAATCTACTCACACATGGAAGTACAACAGCGTctatttaacacatttcaacTAGAAGTGGCATCAATGCCTGCTGGTGCATCCTTCTTCAGAATCTGAACATTACTGACAGAACGCAAGCAAAAAGGTAGACGTGGAAAGAACTGATTAATTagttgaagaagaaaataacctTCATTTAGCCTTAATGTCCTTGGATATGTATTGAACGTCACTGCGCATCATACCTCTTCACCAGGAGTGCACCACACTCTCCATATGCAGAAATAAACTAAGCGAGCAATGTATTTGAAGCAGCACTTTGGTCAAAGCGAGCACAAGTGTGGAGATGTAGCCCACTTTAAGTGCCATTTAGTCGGAGTCACAGCAAATGTTGTGTTCTTACCGATCGCAGATCAGAACTGTAGATGATGTATAATGAAATCGCCACAACTAGTCCTTTGCATTTGATATTGTATGAAGTTGTTGGTGTTAATGAGAAGATTTATCTTGCTTTTATAACTTTATAAAGCATTGTCTTGTGTCAAAACATGTGTTTTGTCAAAAcagttacaattattatttttaaatctgccatgtttatttaaaagctatttcTTGGATTTGTAGTGTCTCTTGCaaccccaaaaaaagaaaaagctcttGCAGTGAGCTGCTGAACATTTATACACATTAATTCCtcataaattaactttttatgaaatatatgtaCTATATACTGAAGTCTGGAATGCAATGTCAATGCAAGTGTGTAAAAGTAttgaatgtttatatattttggtgttttttaGAATCTTTCATTATCTTCATATTGCCTTAAAGAGATTATTCATTCTGCTAGGATAACGTTATGGGATGTTTTACGGGCAGCAGACAATCTTATTTTGTCCTCTATAGTTTAGCATTATGTTCCTCCAAGTACCAACAATAATTGTCAGTAAGGTGTTTTGTACTGTTCAGCCATGCCCTGAAAGCACACAAAGCTGGCTTCAGGACAACAGTGACTTACTCTTTGGCCCTCATGCAattctttccctttttattcTTAACATTTTGGAAACTACCTAGATTAAATCAATGGTTACTTCATTGAAATGTCCAGAGTCTAtttgttatttcattatttgGTACCGTAAGAGTTCTATTGTCTATGAGTTGCTCAGTGCATTGAAAGCAGTGTGACCTTGTTTCCTTGTTGGattttgcagaagaaaaaaaaaacaggaaggttGCTAGTTTAATACCTTCCATTAAATTGTTCTGATTCACTGTGCAGACATCCTTCCTCGCTactgttatgttttaaatgttgaaaatacaaatgtaataaatacgcttttaaaataa

Function

symbol description
mad2l2 Predicted to be involved in DNA damage response, signal transduction resulting in transcription; positive regulation of transcription, DNA-templated; and regulation of protein metabolic process. Predicted to act upstream of or within cell division and cellular response to DNA damage stimulus. Predicted to be located in nucleus and spindle. Predicted to be part of zeta DNA polymerase complex. Human ortholog(s) of this gene implicated in Fanconi anemia complementation group V. Orthologous to human MAD2L2 (mitotic arrest deficient 2 like 2).

NR:

description
PREDICTED: mitotic spindle assembly checkpoint protein MAD2B

GO: NA

KEGG:

id description
K13728 MAD2L2; mitotic spindle assembly checkpoint protein MAD2B

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002227 True 2323 mRNA 0.38 9 7938460 7945017

Neighbor

gene id symbol gene type direction distance location
AMCG00002229 NA coding downstream 30882 7907035 ~ 7907578 (-)
AMCG00002228 NA coding downstream 36794 7888312 ~ 7901666 (-)
AMCG00002230 NA coding downstream 66964 7870894 ~ 7871496 (-)
AMCG00002225 NA coding downstream 81941 7846338 ~ 7856519 (-)
AMCG00002222 NA coding downstream 111903 7820512 ~ 7826557 (-)
AMCG00002226 NA coding upstream 24886 7969903 ~ 7979082 (-)
AMCG00002233 NA coding upstream 67960 8012977 ~ 8014218 (-)
AMCG00002234 NA coding upstream 77660 8022677 ~ 8027024 (-)
AMCG00002237 ajap1 coding upstream 551065 8496082 ~ 8522830 (-)
AMCG00002238 NA coding upstream 761512 8706529 ~ 8708937 (-)
G121754 NA non-coding downstream 93144 7830193 ~ 7845316 (-)
G121718 NA non-coding downstream 274783 7662986 ~ 7663677 (-)
G121716 NA non-coding downstream 279609 7657832 ~ 7658851 (-)
G121689 NA non-coding downstream 375713 7561077 ~ 7562747 (-)
G121447 NA non-coding downstream 1514162 6420041 ~ 6424298 (-)
G121789 NA non-coding upstream 71047 8016064 ~ 8017075 (-)
G121875 NA non-coding upstream 880414 8825431 ~ 8859003 (-)
G121885 NA non-coding upstream 923628 8868645 ~ 8870698 (-)
G121912 NA non-coding upstream 987146 8932163 ~ 8933163 (-)
G121935 NA non-coding upstream 1073109 9018126 ~ 9018327 (-)
AMCG00002223 NA other downstream 99049 7826641 ~ 7839411 (-)
AMCG00002167 NA other downstream 1923067 5975725 ~ 6015393 (-)
G120993 NA other downstream 3718583 4214715 ~ 4219877 (-)
G120927 slc45a1,LOC107756616,LOC106565711,LOC107702000 other downstream 4151916 3784236 ~ 3786544 (-)
G120907 NA other downstream 4222208 3713867 ~ 3716252 (-)
AMCG00002265 NA other upstream 1663733 9608750 ~ 9620127 (-)
AMCG00002275 ube4b,LOC107681967,LOC107570768 other upstream 1812408 9757425 ~ 9801108 (-)
AMCG00002276 NA other upstream 1885502 9830519 ~ 9833224 (-)
AMCG00002279 NA other upstream 1891901 9836918 ~ 9853075 (-)
AMCG00002288 NA other upstream 2324872 10269889 ~ 10279984 (-)

Expression


Co-expression Network