AMCG00002231


Basic Information

Item Value
gene id AMCG00002231
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 8016893 ~ 8022378 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002231
ATGGGATTTATAAAAAAGTTTTTCAAACAGAAAGGTCAACAGAAAGGTCACACCGGCAGCTCGTCAAATGACACGCCGCTCTCCAGCCCCGCCTCCCACGAACACGTGGTTGTGCAGGCGGCCATCATTGTGCGGGGCAAACTGCAGCGCTGCGGGGTTCTGGACAAGGCCGGATCCAGTCGTTCTGCGAAGAGACGCAAGGCTGACCAGCTGGAAACCCAAAGCGATCCCGTGCCCAAGAAACGCCAGCCTGGGGACTGTGAAGGGGCTTGTGATCCTGCAAAGGGGACGGCTCTGGGGGAGAGGGATGGGGGGAATTCCCAGGGGGTCAGTGGAGAGGCTGCGGGGGACCTCGGTGCAGACCCATCCAGTAAAGCGCCTGCCTTGGACACCGGAGAGGCGGGGGGGTCCTCAGATGTAGAGAACGCAGAGCGCAGGACGATGGGATCCGATTGTGAGGTTGTGGTGAATGGCGTACCGGAAGAGGCCGATGAAAGCATGCCGAAGGTCGAGATGCAGATGGACGACGGCATTTTCCTGGATGAGGACAGTAACCAGCCAATGCCAGTGGGACAGTTCTTTGGAAATCTAGAGCTAGTACAGGATTACCCCCCCCGAGCGCCTGTAGCAGGCCGCATGAATCGCCGGGAGTACAGGAGGCTGCACTTTATAGCCAAGGATGACGACGACGATGACTTCTTTGAAGACAGCCACCTGGAAGTGCCTCAGCAgaatggtattattattattattttaggagGCCGAGCAATTaacttaaaaatgcaaacaaacacgaAAGAAAAAAGATTGCTAGCTATTGCCTGTCTTTGAGAGAGATGAGTTTAACAAGCCATCTCCTGGTATGGTGTAACAATAACACAAGAGCCAATCAGATGTTATCAAGACactgctacagtgtgtgtgtgatctgatTGTTGTTTGTCGTAATCAATGTAGAACTGTAGTATTCATGATCACATTTGTGTGCTTTTTCATGGCCAGTATGTCCAACTCTTCACCAGCTTGTTTCGGTGCCTTTCCTGTCAGTTCTGATCAATAGGGTCTTATTAATTCCTGACATGACTACGTTTTCCTCAGGATGTAAGCTCTgggacacagcacacagatgGATCGGTGTATCTTCTTTTAATCTCTTTCACAGGTGATGACACGTGGCGtacataaattattttcttttcatgtagGTGCCACTGAACGTTATTAAAGCCAAATCCTTCTCACCATTGCACTCTGTGGAGCTTTGCATCTCTGCTGCAGTTTAtaaactgattggaaaactatacaaaatgttatttgtagAATCTTCCCCTCCAGACAGTTGCAACTGTACCATACAATCAGGAAGCTGCATAAGAAATGGAAGCAAATGAGAGAGGATCcttacaacaaataaaaaacagaaaaaatggaCTTTTTTGATCTACAACCAAGTACCCCCCATCAAATCCCTCCTTGACTGACGTGCcaaagcagtgtttttaaatgtgatcaGTTTTGTCCTCCGCTGCAGGAGAGCAGTGTGAGTGCTGTAGATGACGTgtgattatttttgtgttgttgatcAGTAGTTTTATGACATGGCTTAAGATGGTTCGGTATGAAGGagtttgtattgtatgtaattGAAAACCAAATGTAGGCATCTGTTCATAATGGACTGTGGCAGCTTTTGAAGCAATGAATGTTACCTCTAGTTTACCATGAGCAATTTGCACTATGTTCCTGTTGGATCTGCCTTAATCCCCATGACTGCTTAAAACATTAATAGGGGATAGTCCTTATTTAACTCCATTACATACATTGTTTGGTGTATTGAACCTCTGTAAGGTAATATCTGTTATTCtacaggttttatttaattttctatacaTATGCATTCAAATACTAACTGCATATCTATGGGTAACTTGATTGCCAGTCATATGTTCTTTAACTTATTCTTAATATAGTGCATGAATTGCAAAATAGTTTGCCTGTATCATATTAGTATATACCTGATGCCATTGTCCTGCAAATAaggttatattttgtatataaattgATTCCAATGTTCATCTCTGTGAAACCTGCCATGTATAAGAAGATATTGGAAGATACATTAatcattttgttatatttttatataagtatcactgtaaaataaatgtacatcttGATTTCAAGTCTGTATTATTTACTTAATGTtcacataaaatgttattaaaac

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002231 True 2227 mRNA 0.43 4 8016893 8022378

Neighbor

gene id symbol gene type direction distance location
AMCG00002232 NA coding upstream 6353 7980304 ~ 8010540 (+)
AMCG00002224 NA coding upstream 78960 7927590 ~ 7937933 (+)
AMCG00002217 NA coding upstream 353204 7658258 ~ 7663689 (+)
AMCG00002216 NA coding upstream 626242 7382538 ~ 7390651 (+)
AMCG00002213 plch2,LOC107602463 coding upstream 638453 7325990 ~ 7378440 (+)
AMCG00002236 NA coding downstream 105819 8128197 ~ 8151854 (+)
AMCG00002235 NA coding downstream 138948 8161326 ~ 8178947 (+)
AMCG00002241 NA coding downstream 783738 8806116 ~ 8809795 (+)
AMCG00002246 gnb1,LOC107385217,LOC104919476,LOC100703896,LOC108231344 coding downstream 837055 8859433 ~ 8867964 (+)
AMCG00002244 nadk coding downstream 851412 8873790 ~ 8893838 (+)
G121767 NA non-coding upstream 63269 7945365 ~ 7953624 (+)
G121741 NA non-coding upstream 99650 7910558 ~ 7917243 (+)
G121722 NA non-coding upstream 182682 7829807 ~ 7834211 (+)
G121688 ski,LOC106572818 non-coding upstream 368577 7646718 ~ 7648316 (+)
G121680 NA non-coding upstream 454161 7561066 ~ 7562732 (+)
G121862 NA non-coding downstream 793952 8816330 ~ 8816553 (+)
G121981 NA non-coding downstream 1225939 9248317 ~ 9313334 (+)
G121999 NA non-coding downstream 1520237 9542615 ~ 9562591 (+)
G122058 NA non-coding downstream 1602866 9625244 ~ 9626221 (+)
G122063 NA non-coding downstream 1606220 9628598 ~ 9628833 (+)
AMCG00002215 NA other upstream 605663 7393800 ~ 7411230 (+)
AMCG00002190 acot7 other upstream 1414285 6586654 ~ 6602608 (+)
AMCG00002152 NA other upstream 2790237 5218830 ~ 5226656 (+)
AMCG00002098 NA other upstream 4474716 3533814 ~ 3542177 (+)
G120742 NA other upstream 5057418 2956908 ~ 2959475 (+)
AMCG00002245 NA other downstream 716393 8738771 ~ 8792478 (+)
AMCG00002272 NA other downstream 1821827 9844205 ~ 9851312 (+)
AMCG00002294 rere other downstream 2545534 10567912 ~ 10604839 (+)
AMCG00002296 NA other downstream 2692421 10714799 ~ 10753893 (+)
AMCG00002310 NA other downstream 3335174 11357552 ~ 11359840 (+)

Expression


Co-expression Network