Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00002233 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 8012977 ~ 8014218 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0006486 | protein glycosylation | biological_process |
| GO:0005794 | Golgi apparatus | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0008378 | galactosyltransferase activity | molecular_function |
| id | description |
|---|---|
| K09664 | B3GNT7; beta-1,3-N-acetylglucosaminyltransferase 7 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00002233 | True | 1242 | mRNA | 0.48 | 1 | 8012977 | 8014218 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00002226 | NA | coding | downstream | 33895 | 7969903 ~ 7979082 (-) |
| AMCG00002227 | mad2l2 | coding | downstream | 67960 | 7938460 ~ 7945017 (-) |
| AMCG00002229 | NA | coding | downstream | 105399 | 7907035 ~ 7907578 (-) |
| AMCG00002228 | NA | coding | downstream | 111311 | 7888312 ~ 7901666 (-) |
| AMCG00002230 | NA | coding | downstream | 141481 | 7870894 ~ 7871496 (-) |
| AMCG00002234 | NA | coding | upstream | 8459 | 8022677 ~ 8027024 (-) |
| AMCG00002237 | ajap1 | coding | upstream | 481864 | 8496082 ~ 8522830 (-) |
| AMCG00002238 | NA | coding | upstream | 692311 | 8706529 ~ 8708937 (-) |
| AMCG00002239 | gabrd,LOC107690714,LOC107711789,LOC107684467 | coding | upstream | 698247 | 8712465 ~ 8720117 (-) |
| AMCG00002240 | calml6 | coding | upstream | 796101 | 8810319 ~ 8813591 (-) |
| G121754 | NA | non-coding | downstream | 167661 | 7830193 ~ 7845316 (-) |
| G121718 | NA | non-coding | downstream | 349300 | 7662986 ~ 7663677 (-) |
| G121716 | NA | non-coding | downstream | 354126 | 7657832 ~ 7658851 (-) |
| G121689 | NA | non-coding | downstream | 450230 | 7561077 ~ 7562747 (-) |
| G121447 | NA | non-coding | downstream | 1588679 | 6420041 ~ 6424298 (-) |
| G121789 | NA | non-coding | upstream | 1846 | 8016064 ~ 8017075 (-) |
| G121875 | NA | non-coding | upstream | 811213 | 8825431 ~ 8859003 (-) |
| G121885 | NA | non-coding | upstream | 854427 | 8868645 ~ 8870698 (-) |
| G121912 | NA | non-coding | upstream | 917945 | 8932163 ~ 8933163 (-) |
| G121935 | NA | non-coding | upstream | 1003908 | 9018126 ~ 9018327 (-) |
| AMCG00002223 | NA | other | downstream | 173566 | 7826641 ~ 7839411 (-) |
| AMCG00002167 | NA | other | downstream | 1997584 | 5975725 ~ 6015393 (-) |
| G120993 | NA | other | downstream | 3793100 | 4214715 ~ 4219877 (-) |
| G120927 | slc45a1,LOC107756616,LOC106565711,LOC107702000 | other | downstream | 4226433 | 3784236 ~ 3786544 (-) |
| G120907 | NA | other | downstream | 4296725 | 3713867 ~ 3716252 (-) |
| AMCG00002265 | NA | other | upstream | 1594532 | 9608750 ~ 9620127 (-) |
| AMCG00002275 | ube4b,LOC107681967,LOC107570768 | other | upstream | 1743207 | 9757425 ~ 9801108 (-) |
| AMCG00002276 | NA | other | upstream | 1816301 | 9830519 ~ 9833224 (-) |
| AMCG00002279 | NA | other | upstream | 1822700 | 9836918 ~ 9853075 (-) |
| AMCG00002288 | NA | other | upstream | 2255671 | 10269889 ~ 10279984 (-) |
