Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00002236 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 8128197 ~ 8151854 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0060034 | notochord cell differentiation | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00002236 | True | 879 | mRNA | 0.57 | 6 | 8128197 | 8151854 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00002231 | NA | coding | upstream | 105819 | 8016893 ~ 8022378 (+) |
| AMCG00002232 | NA | coding | upstream | 117657 | 7980304 ~ 8010540 (+) |
| AMCG00002224 | NA | coding | upstream | 190264 | 7927590 ~ 7937933 (+) |
| AMCG00002217 | NA | coding | upstream | 464508 | 7658258 ~ 7663689 (+) |
| AMCG00002216 | NA | coding | upstream | 737546 | 7382538 ~ 7390651 (+) |
| AMCG00002235 | NA | coding | downstream | 9472 | 8161326 ~ 8178947 (+) |
| AMCG00002241 | NA | coding | downstream | 654262 | 8806116 ~ 8809795 (+) |
| AMCG00002246 | gnb1,LOC107385217,LOC104919476,LOC100703896,LOC108231344 | coding | downstream | 707579 | 8859433 ~ 8867964 (+) |
| AMCG00002244 | nadk | coding | downstream | 721936 | 8873790 ~ 8893838 (+) |
| AMCG00002242 | NA | coding | downstream | 755079 | 8906933 ~ 8916579 (+) |
| G121767 | NA | non-coding | upstream | 174573 | 7945365 ~ 7953624 (+) |
| G121741 | NA | non-coding | upstream | 210954 | 7910558 ~ 7917243 (+) |
| G121722 | NA | non-coding | upstream | 293986 | 7829807 ~ 7834211 (+) |
| G121688 | ski,LOC106572818 | non-coding | upstream | 479881 | 7646718 ~ 7648316 (+) |
| G121680 | NA | non-coding | upstream | 565465 | 7561066 ~ 7562732 (+) |
| G121862 | NA | non-coding | downstream | 664476 | 8816330 ~ 8816553 (+) |
| G121981 | NA | non-coding | downstream | 1096463 | 9248317 ~ 9313334 (+) |
| G121999 | NA | non-coding | downstream | 1390761 | 9542615 ~ 9562591 (+) |
| G122058 | NA | non-coding | downstream | 1473390 | 9625244 ~ 9626221 (+) |
| G122063 | NA | non-coding | downstream | 1476744 | 9628598 ~ 9628833 (+) |
| AMCG00002215 | NA | other | upstream | 716967 | 7393800 ~ 7411230 (+) |
| AMCG00002190 | acot7 | other | upstream | 1525589 | 6586654 ~ 6602608 (+) |
| AMCG00002152 | NA | other | upstream | 2901541 | 5218830 ~ 5226656 (+) |
| AMCG00002098 | NA | other | upstream | 4586020 | 3533814 ~ 3542177 (+) |
| G120742 | NA | other | upstream | 5168722 | 2956908 ~ 2959475 (+) |
| AMCG00002245 | NA | other | downstream | 586917 | 8738771 ~ 8792478 (+) |
| AMCG00002272 | NA | other | downstream | 1692351 | 9844205 ~ 9851312 (+) |
| AMCG00002294 | rere | other | downstream | 2416058 | 10567912 ~ 10604839 (+) |
| AMCG00002296 | NA | other | downstream | 2562945 | 10714799 ~ 10753893 (+) |
| AMCG00002310 | NA | other | downstream | 3205698 | 11357552 ~ 11359840 (+) |
