Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00002237 |
| gene name | ajap1 |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 8496082 ~ 8522830 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| symbol | description |
|---|---|
| ajap1 | Predicted to enable beta-catenin binding activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in adherens junction; cell-cell contact zone; and cytoplasmic side of plasma membrane. Predicted to be spanning component of plasma membrane. Orthologous to human AJAP1 (adherens junctions associated protein 1). |
| description |
|---|
| PREDICTED: adherens junction-associated protein 1 isoform X2 |
| id | description |
|---|---|
| K21387 | AJAP1; adherens junction-associated protein 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00002237 | True | 1268 | mRNA | 0.51 | 5 | 8496082 | 8522830 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00002234 | NA | coding | downstream | 469058 | 8022677 ~ 8027024 (-) |
| AMCG00002233 | NA | coding | downstream | 481864 | 8012977 ~ 8014218 (-) |
| AMCG00002226 | NA | coding | downstream | 517000 | 7969903 ~ 7979082 (-) |
| AMCG00002227 | mad2l2 | coding | downstream | 551065 | 7938460 ~ 7945017 (-) |
| AMCG00002229 | NA | coding | downstream | 588504 | 7907035 ~ 7907578 (-) |
| AMCG00002238 | NA | coding | upstream | 183699 | 8706529 ~ 8708937 (-) |
| AMCG00002239 | gabrd,LOC107690714,LOC107711789,LOC107684467 | coding | upstream | 189635 | 8712465 ~ 8720117 (-) |
| AMCG00002240 | calml6 | coding | upstream | 287489 | 8810319 ~ 8813591 (-) |
| AMCG00002247 | NA | coding | upstream | 375795 | 8898625 ~ 8903588 (-) |
| AMCG00002249 | mmp23b,LOC106572002 | coding | upstream | 411139 | 8933969 ~ 8946187 (-) |
| G121789 | NA | non-coding | downstream | 479007 | 8016064 ~ 8017075 (-) |
| G121754 | NA | non-coding | downstream | 650766 | 7830193 ~ 7845316 (-) |
| G121718 | NA | non-coding | downstream | 832405 | 7662986 ~ 7663677 (-) |
| G121716 | NA | non-coding | downstream | 837231 | 7657832 ~ 7658851 (-) |
| G121689 | NA | non-coding | downstream | 933335 | 7561077 ~ 7562747 (-) |
| G121875 | NA | non-coding | upstream | 302601 | 8825431 ~ 8859003 (-) |
| G121885 | NA | non-coding | upstream | 345815 | 8868645 ~ 8870698 (-) |
| G121912 | NA | non-coding | upstream | 409333 | 8932163 ~ 8933163 (-) |
| G121935 | NA | non-coding | upstream | 495296 | 9018126 ~ 9018327 (-) |
| G122019 | NA | non-coding | upstream | 615617 | 9138447 ~ 9213429 (-) |
| AMCG00002223 | NA | other | downstream | 656671 | 7826641 ~ 7839411 (-) |
| AMCG00002167 | NA | other | downstream | 2480689 | 5975725 ~ 6015393 (-) |
| G120993 | NA | other | downstream | 4276205 | 4214715 ~ 4219877 (-) |
| G120927 | slc45a1,LOC107756616,LOC106565711,LOC107702000 | other | downstream | 4709538 | 3784236 ~ 3786544 (-) |
| G120907 | NA | other | downstream | 4779830 | 3713867 ~ 3716252 (-) |
| AMCG00002265 | NA | other | upstream | 1085920 | 9608750 ~ 9620127 (-) |
| AMCG00002275 | ube4b,LOC107681967,LOC107570768 | other | upstream | 1234595 | 9757425 ~ 9801108 (-) |
| AMCG00002276 | NA | other | upstream | 1307689 | 9830519 ~ 9833224 (-) |
| AMCG00002279 | NA | other | upstream | 1314088 | 9836918 ~ 9853075 (-) |
| AMCG00002288 | NA | other | upstream | 1747059 | 10269889 ~ 10279984 (-) |
