AMCG00002241


Basic Information

Item Value
gene id AMCG00002241
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 8806116 ~ 8809795 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002241
atgCTCCCATTGGAGACCAGCACCGCTTACCTGCAGACACGCCTGCAAGGCGTGTCTGCAGGTATTGTCAAGAACAACCACAACAGCGGCGGATACGATTTGCGCAGACCCCCCACATTGTCATATTATGGGTTGATCTTAATGGTCATATCTGTTGTGCTGGTGTTTGGTATCCTCGTGAGTTGCATCAAGTTCTGCTGTAAGACCAACAAGCCCTCTGCGTTCTCTGGACACCCATTTGAAGTCACTGTGATTTCTGTGGACAATGAGAGCACCGTGCAAAGCACAAGCACCTTATCCTCAGCCTATGGCCCCTCTCACGGCAGCCGCCCCTCACTGTCCTACAGAGTGGAGATGGGCAACAACTCTTCCCCTCCACCCTATAATCTCTACGCTCTGGAGAACCCACCAGAGTATGAAGAAGCCTTAAAGATGCCCGTGAATGACCATGCCATCCTGCCAGGTGTCCGGAAAGCAGACAGCTCTGCAAACGAGACCATTTCTACAGAAGCCCAGGAGGAGCCTCTCTCAGAGGAGGATATGAACATGAGAAACCAGGAGCAGCAAGATCTGGAGAACCCCCCAGAGGCCCAGGCTGACTCTGCTGAGGAAGAGCCTCCTCAGTACGAGCTGTACGACACTATCGGAGAACACCCTGAGGAGGAATTCAGTGACATAGAACTGGATGACACGGACTCCATACACAGTCACGAGGTGGAAATAATTTGATGAACATCTACAAAACCAATGACTTGGACTTGTTGGTCTTTTGCTCTGTGATCACGCAGTCAGTGGCCAAGGTACCAAGACCTGGACGCTGCCCTAAAAACACAAGGACCCTAACCGCACCAATGCCAAATCAGGCTTCAACTCCAGAAGAAAGTGCCACGTCATGAAGAGCTTTGTCACAGTGCAGTCAGCAGCTTCCTGTAACCCAGGCTTTATGCTGGTTATCCTGGCAATTGCAGCAGGGTTTGAGCCTTGTGTTGCTGTAGATCGTCATGGTCAGTTGGAAGTCAGATGACTAGGGGTTTGCTTGGATTACACAAAGCTTGTGTAAAACAATGGGCTTTCAGTGTTCCTTAGAGCACCACCCTTTCTGTGCGCTTCAACAGTGCTTGGTTCCCACAGCCTGTAGACGTCATTTGTCTTACCAGTCATGGAACAGATCCTTTAAGATCGGATCTGTCAGGTGGGATTAGAAGAGTAACGTTGCATCTGGAAGACATTTTCCAAATATTCTGTGTTTCTCAGTTCTAGGGTGTATGTTGGCAACTCAAATACCCTGTTTTTCCCATTGCAAACTGTCTCTTTCAAGGGTGTAGCTTCCGTCTGCAGTTGcagttttgcaaaaaaataGGGCCTTTAGTGTTATCCTACCAATGGCCGCCCCTTCCCTTCACACAAACACCAAGAAGGTGTCCTGCTGTCTGTCAGTCTTACTGTAGCTGAGTATCCCAGAGTTTTGTATGTGTAACAAGGACTCTGCCTTGCTTTCTCTTTATAAAGAGATGTATTTCACAGCATGTTGCTGCAGTTAATATCATTACAGAGTAatggaagatgttttttttgtttttttaactttttgtacAGATGGTGAAAAAGCAAGCAATTCAAAGCAAGTGTAACCTGTTTTCTCATCCATAGCAAACCAGAGTTACATGAATCAAAGGGATTGAGCATTTAATGCAATTTGCACATTGAATATAAAGTCAcctttttcaatactacagtTAAGGTATGCTCCTCTATAACATGTATTGCTCAACcaaattacagattacagataAGTGTGGTAGGTGCCATGTGCATGTTACGCAGAATCTAATCAATTAGACAATACACATATTGATTTGATTCTctacattatattgtattaaatcagtttttataAAGGCATTCTTGTGCCCATGTccatttatattgtgtttttgtatttttacaaatcTTGCTTGGAATTGTAATGTGGTTTACAAAGCTTTCACATCgatttttttcatatatatacaaactttaaaaatatgtctgtTAAACCAAGTggtttgaataataaaataatacacaataacttATAATA

Function

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002241 True 2080 mRNA 0.44 5 8806116 8809795

Neighbor

gene id symbol gene type direction distance location
AMCG00002235 NA coding upstream 627169 8161326 ~ 8178947 (+)
AMCG00002236 NA coding upstream 654262 8128197 ~ 8151854 (+)
AMCG00002231 NA coding upstream 783738 8016893 ~ 8022378 (+)
AMCG00002232 NA coding upstream 795576 7980304 ~ 8010540 (+)
AMCG00002224 NA coding upstream 868183 7927590 ~ 7937933 (+)
AMCG00002246 gnb1,LOC107385217,LOC104919476,LOC100703896,LOC108231344 coding downstream 49638 8859433 ~ 8867964 (+)
AMCG00002244 nadk coding downstream 63995 8873790 ~ 8893838 (+)
AMCG00002242 NA coding downstream 97138 8906933 ~ 8916579 (+)
AMCG00002243 NA coding downstream 112119 8921914 ~ 8933126 (+)
AMCG00002257 mtor,LOC106941359 coding downstream 214276 9024071 ~ 9026586 (+)
G121767 NA non-coding upstream 852492 7945365 ~ 7953624 (+)
G121741 NA non-coding upstream 888873 7910558 ~ 7917243 (+)
G121722 NA non-coding upstream 971905 7829807 ~ 7834211 (+)
G121688 ski,LOC106572818 non-coding upstream 1157800 7646718 ~ 7648316 (+)
G121680 NA non-coding upstream 1243384 7561066 ~ 7562732 (+)
G121862 NA non-coding downstream 6535 8816330 ~ 8816553 (+)
G121981 NA non-coding downstream 438522 9248317 ~ 9313334 (+)
G121999 NA non-coding downstream 732820 9542615 ~ 9562591 (+)
G122058 NA non-coding downstream 815449 9625244 ~ 9626221 (+)
G122063 NA non-coding downstream 818803 9628598 ~ 9628833 (+)
AMCG00002245 NA other upstream 13638 8738771 ~ 8792478 (+)
AMCG00002215 NA other upstream 1394886 7393800 ~ 7411230 (+)
AMCG00002190 acot7 other upstream 2203508 6586654 ~ 6602608 (+)
AMCG00002152 NA other upstream 3579460 5218830 ~ 5226656 (+)
AMCG00002098 NA other upstream 5263939 3533814 ~ 3542177 (+)
AMCG00002272 NA other downstream 1034410 9844205 ~ 9851312 (+)
AMCG00002294 rere other downstream 1758117 10567912 ~ 10604839 (+)
AMCG00002296 NA other downstream 1905004 10714799 ~ 10753893 (+)
AMCG00002310 NA other downstream 2547757 11357552 ~ 11359840 (+)
AMCG00002311 ttll10 other downstream 2555819 11365614 ~ 11379568 (+)

Expression


Co-expression Network