Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00002247 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 8898625 ~ 8903588 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0043603 | cellular amide metabolic process | biological_process |
| GO:0043604 | amide biosynthetic process | biological_process |
| GO:1901566 | organonitrogen compound biosynthetic process | biological_process |
| GO:0009059 | macromolecule biosynthetic process | biological_process |
| GO:0043043 | peptide biosynthetic process | biological_process |
| GO:0006412 | translation | biological_process |
| GO:0044267 | cellular protein metabolic process | biological_process |
| GO:0006518 | peptide metabolic process | biological_process |
| GO:0034645 | cellular macromolecule biosynthetic process | biological_process |
| id | description |
|---|---|
| ko03010 | Ribosome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00002247 | True | 1179 | mRNA | 0.52 | 8 | 8898625 | 8903588 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00002240 | calml6 | coding | downstream | 85034 | 8810319 ~ 8813591 (-) |
| AMCG00002239 | gabrd,LOC107690714,LOC107711789,LOC107684467 | coding | downstream | 178508 | 8712465 ~ 8720117 (-) |
| AMCG00002238 | NA | coding | downstream | 189688 | 8706529 ~ 8708937 (-) |
| AMCG00002237 | ajap1 | coding | downstream | 375795 | 8496082 ~ 8522830 (-) |
| AMCG00002234 | NA | coding | downstream | 871601 | 8022677 ~ 8027024 (-) |
| AMCG00002249 | mmp23b,LOC106572002 | coding | upstream | 30381 | 8933969 ~ 8946187 (-) |
| AMCG00002251 | mib2 | coding | upstream | 53522 | 8957110 ~ 8982144 (-) |
| AMCG00002252 | mib2 | coding | upstream | 92114 | 8995702 ~ 9005887 (-) |
| AMCG00002248 | ubiad1 | coding | upstream | 115019 | 9018607 ~ 9022271 (-) |
| AMCG00002250 | NA | coding | upstream | 151726 | 9055314 ~ 9061095 (-) |
| G121885 | NA | non-coding | downstream | 27927 | 8868645 ~ 8870698 (-) |
| G121875 | NA | non-coding | downstream | 39622 | 8825431 ~ 8859003 (-) |
| G121789 | NA | non-coding | downstream | 881550 | 8016064 ~ 8017075 (-) |
| G121754 | NA | non-coding | downstream | 1053309 | 7830193 ~ 7845316 (-) |
| G121718 | NA | non-coding | downstream | 1234948 | 7662986 ~ 7663677 (-) |
| G121912 | NA | non-coding | upstream | 28575 | 8932163 ~ 8933163 (-) |
| G121935 | NA | non-coding | upstream | 114538 | 9018126 ~ 9018327 (-) |
| G122019 | NA | non-coding | upstream | 234859 | 9138447 ~ 9213429 (-) |
| G122037 | NA | non-coding | upstream | 380381 | 9283969 ~ 9287587 (-) |
| G122061 | tardbp,LOC107716231,LOC107586522 | non-coding | upstream | 717440 | 9621028 ~ 9621472 (-) |
| AMCG00002223 | NA | other | downstream | 1059214 | 7826641 ~ 7839411 (-) |
| AMCG00002167 | NA | other | downstream | 2883232 | 5975725 ~ 6015393 (-) |
| G120993 | NA | other | downstream | 4678748 | 4214715 ~ 4219877 (-) |
| G120927 | slc45a1,LOC107756616,LOC106565711,LOC107702000 | other | downstream | 5112081 | 3784236 ~ 3786544 (-) |
| G120907 | NA | other | downstream | 5182373 | 3713867 ~ 3716252 (-) |
| AMCG00002265 | NA | other | upstream | 705162 | 9608750 ~ 9620127 (-) |
| AMCG00002275 | ube4b,LOC107681967,LOC107570768 | other | upstream | 853837 | 9757425 ~ 9801108 (-) |
| AMCG00002276 | NA | other | upstream | 926931 | 9830519 ~ 9833224 (-) |
| AMCG00002279 | NA | other | upstream | 933330 | 9836918 ~ 9853075 (-) |
| AMCG00002288 | NA | other | upstream | 1366301 | 10269889 ~ 10279984 (-) |
