XLOC_000593 (CU986305.1)


Basic Information

Item Value
gene id XLOC_000593
gene name CU986305.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 46827891 ~ 46845676 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001023
CAGCCACTTGATGATCTTTAACCTAGTGACAACGGCAGCCACACCAGACCCATCCTGAGGTGTGACAGCCATCATCCCACCCGTGGAGTTAAAAGTGGATTCAGCAGCATCAGACCTGTTTTACCTGTACAGTCAGCCGAACACAAACTCATGATACTGGCTAATGACGATAAGTCGAAGACAGTCTCGAAGTTCCCTCAAGTCTCTGTCCGAGCGAGAACCACCTTCCGCAACAGCCATTCTCAAGCATATGTTCTTCAGATCAACACTGTCCTGAAAGAGAGAAAGGGGGAAATAGGAATCTCCTCAACAGAGAAGCGCCTGTAAACAGAACAGTGACGCTTCATAAGTGCAGCACAATACACTCCAATAGAGGGCGCCATAACTGCATGCAGAACAGCAGGGGGAAAGCTTAACCAGATTCAGAGCAgcagatattattcaagacaggATAAGAGGGGCCGAAGCTCAGCAGAGTATGAATTGAGGGCAATTGGTATGAAAATCATGATGATGAAAAGCAGCACAGCGTGTCTGCACACATTCACAATGCTCCATCTGCAGTCAACTCAAGTCTGCGGGTGCATCTCAGTCACCTCATTAGAGGAAACAACAATCTTGAAACAAGTCATTTGCAAGTGACGCCCTGCAAAAGTAATTACTGAAGAATAGCCTCactgaacagaaacaaaacactTGACATGAATCTAATAGCTTGTTAAagagaaaaaattaataaaattagtttgataaataaatgcattttttgagCAAGTAtgaattaaactaaatattttaaagactttagtgttacaaaagattttggtttggaataaatgttgttttaagtATGTTTTT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000095507

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001023 True 858 lncRNA 0.42 5 46827891 46845676

Neighbor

gene id symbol gene type direction distance location
XLOC_000592 NA coding upstream 91775 46735728 ~ 46736116 (+)
XLOC_000591 NA coding upstream 100934 46719096 ~ 46726957 (+)
XLOC_000590 arl11 coding upstream 173363 46652615 ~ 46654528 (+)
XLOC_000589 cab39l coding upstream 210608 46598502 ~ 46617283 (+)
XLOC_000588 mcf2la coding upstream 233603 46493944 ~ 46594288 (+)
XLOC_000594 tmprss3b coding downstream 102334 46948010 ~ 46957351 (+)
XLOC_000595 NA coding downstream 114226 46959902 ~ 46964228 (+)
XLOC_000596 cryzl1 coding downstream 243825 47089501 ~ 47105214 (+)
XLOC_000597 NA coding downstream 307514 47153190 ~ 47155997 (+)
XLOC_000598 cbr1 coding downstream 320166 47165842 ~ 47173403 (+)
XLOC_000586 BX465849.1 non-coding upstream 426255 46400612 ~ 46401636 (+)
XLOC_000585 NA non-coding upstream 520341 46307015 ~ 46307550 (+)
XLOC_000584 NA non-coding upstream 555565 46263451 ~ 46272326 (+)
XLOC_000602 NA non-coding downstream 607917 47453593 ~ 47459506 (+)
XLOC_000608 CR381623.1 non-coding downstream 1051593 47897269 ~ 47897385 (+)
XLOC_000609 CR381623.2 non-coding downstream 1068419 47914095 ~ 47914209 (+)

Expression


Co-expression Network