AMCG00002277


Basic Information

Item Value
gene id AMCG00002277
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 9802308 ~ 9807298 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002277
GGCTTCAGCATGGCTGTGAATTACACTGGCACCTGGGACATGGACAGCAATGTCAACTTTCAAGGTTACATGATGGCGCTTGGCATCGATTTTGCAACACGGAAGATTGCAGGCACGCTGAAGCCTCAGAAGGTGATTGAGCAAAACGGGGATGTCTTCACGATTAAAACGCTCAGCTCGCTCAGGAACTACAGCTCTTCATTTGTTGTAGGGGAAGAATTTGAGGAGGACACTAAGGGACTGGACAACAGGAAATGCAAGTCTCTGGTGTCCTGGGACAATGGGAAGCTGGTGTGTGTTCAGAAGGGAGAGAAGAAGAATAGAGGTTGGACACATTGGATCGAAGGCGACGATCTACACCTGGGACTCAGACGCAGGGCCTTGGAGGGGCCTGCCAAGCCTGCGGGGCTCTTATCCACCCCTCTGCCGCAGCTGTTCGCTGAAGTGTTGTCGAGTGTACAC

Function

GO:

id name namespace
GO:0006810 transport biological_process
GO:0005215 transporter activity molecular_function
GO:0008289 lipid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002277 True 462 mRNA 0.52 4 9802308 9807298

Neighbor

gene id symbol gene type direction distance location
AMCG00002268 NA coding downstream 77042 9693760 ~ 9725266 (-)
AMCG00002269 kif1b coding downstream 109333 9661508 ~ 9692975 (-)
AMCG00002270 pgd,LOC107716232,LOC107681986 coding downstream 151698 9643246 ~ 9650610 (-)
AMCG00002267 NA coding downstream 165042 9630130 ~ 9637266 (-)
AMCG00002271 NA coding downstream 172629 9628650 ~ 9629679 (-)
AMCG00002280 NA coding upstream 170478 9977776 ~ 10006571 (-)
AMCG00002286 NA coding upstream 217121 10024419 ~ 10030406 (-)
AMCG00002285 NA coding upstream 259614 10066912 ~ 10076666 (-)
AMCG00002283 slc25a33,LOC107708828 coding upstream 271859 10079157 ~ 10093103 (-)
AMCG00002282 spsb1,LOC107716103,LOC107687410,LOC107703063,LOC107591103,LOC107737563,LOC103042472 coding upstream 382465 10189763 ~ 10197544 (-)
G122061 tardbp,LOC107716231,LOC107586522 non-coding downstream 180836 9621028 ~ 9621472 (-)
G122037 NA non-coding downstream 514721 9283969 ~ 9287587 (-)
G122019 NA non-coding downstream 588879 9138447 ~ 9213429 (-)
G121935 NA non-coding downstream 783981 9018126 ~ 9018327 (-)
G121912 NA non-coding downstream 869145 8932163 ~ 8933163 (-)
G122131 NA non-coding upstream 40937 9848235 ~ 9851376 (-)
G122226 NA non-coding upstream 415915 10223213 ~ 10224982 (-)
G122302 NA non-coding upstream 943113 10750411 ~ 10750781 (-)
G122319 NA non-coding upstream 1004888 10812186 ~ 10813876 (-)
G122376 NA non-coding upstream 1460266 11267564 ~ 11274527 (-)
AMCG00002275 ube4b,LOC107681967,LOC107570768 other downstream 1200 9757425 ~ 9801108 (-)
AMCG00002265 NA other downstream 182181 9608750 ~ 9620127 (-)
AMCG00002223 NA other downstream 1962897 7826641 ~ 7839411 (-)
AMCG00002167 NA other downstream 3786915 5975725 ~ 6015393 (-)
G120993 NA other downstream 5582431 4214715 ~ 4219877 (-)
AMCG00002276 NA other upstream 23221 9830519 ~ 9833224 (-)
AMCG00002279 NA other upstream 29620 9836918 ~ 9853075 (-)
AMCG00002288 NA other upstream 462591 10269889 ~ 10279984 (-)
AMCG00002301 NA other upstream 1030506 10837804 ~ 10847201 (-)
AMCG00002317 plekhm2 other upstream 1706702 11514000 ~ 11527918 (-)

Expression


Co-expression Network