AMCG00002285


Basic Information

Item Value
gene id AMCG00002285
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 10066912 ~ 10076666 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002285
ATGGACGTTTTTAACCAAATATTAGCAGAATACCCTCAGCTGACCCTTGCCGGTGGAGTCGGGGCGACAGTGTGCACTGCTGGAGCCGTCATTTACAGAATTGCAACGAGAAAGAAGCCTACTCATGTCAATGTCAATTGCTGGTTCTGTAACCAGGACACAATCGTGCCATATGGGAACAGAAATTGCTGGGACTGCCCAAACTGTGAACAGTACAATGGCTTTCAAGAGAATGGTGACTACAACAAACCCATTCCTGCTCAGTACATGGAACACCTGAATCACGGAGTTTCTGCCGGTCTTCCTGTGCCAGACACATCCAAGACTCTACACTGGGTTAACTGCCAGATGTTACTGTGCAAGAAATGCAACAATAACCAGACTCTGAAGATCAAACAGCTGGCTTCGTTTGCACCAAGAGAAGAGACCGCCGTGGAGTATTACATCAAGTACCAGAACCGTCAGCTCCGGGCTCTGCTCTTCAACCACCAGCTCAGACGCAGTAGGGATGCTGACAAGGCCTTTATACAGAATTCCTACACCTTTTCCACTCCTGCTTGGGTGATATTTTTACGGATCCTGGCCTTCCTTACCTGCTCTTTCCTGGTGGCACTGATGATCTACGGCTCTGGGGGCCCTTTTATTCACGACAGCCCCTCACAGCCTGCTGCCAATGCGTCGGAGTATCCGCCTGGGAACGGCAGCAGCAGCGAGAGCATTCGTGTCTGGCCGGAGCTCCTGAGTCACCTTCCCGAGGAAGCTGTGGAGAATGCGAGGGCTGTGTGGGACTTTGGGAGACACCATCAGATGGCAGTTGTGGCCCTGGGCCTGTTCATGTGCCTCCTGGCTGTGCTCATGGGTGGGCGCCTCAGACTTCGGCGCATTGACGCTGTGGCCTCCATCCTGTGGTTCCTTGTGATGGCTTTGCATCTGGTGGAGAACTACCTGAAAACGGACGTCCCCAGCTGGCTGGACACGGTCAAACTCAGTACCACCTCCCTCTGTTGCGTGGTGGGCTTCACGGCTGCCATGGCCACACGCAAGTCCACCGGCCAGAGAAGAACCAGAGCTCGA

Function

GO: NA

KEGG:

id description
ko03440 Homologous recombination
ko04110 Cell cycle
ko04111 Cell cycle - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002285 True 1074 mRNA 0.54 6 10066912 10076666

Neighbor

gene id symbol gene type direction distance location
AMCG00002286 NA coding downstream 36506 10024419 ~ 10030406 (-)
AMCG00002280 NA coding downstream 60341 9977776 ~ 10006571 (-)
AMCG00002277 NA coding downstream 259614 9802308 ~ 9807298 (-)
AMCG00002268 NA coding downstream 341646 9693760 ~ 9725266 (-)
AMCG00002269 kif1b coding downstream 373937 9661508 ~ 9692975 (-)
AMCG00002283 slc25a33,LOC107708828 coding upstream 2491 10079157 ~ 10093103 (-)
AMCG00002282 spsb1,LOC107716103,LOC107687410,LOC107703063,LOC107591103,LOC107737563,LOC103042472 coding upstream 113097 10189763 ~ 10197544 (-)
AMCG00002281 NA coding upstream 148622 10225288 ~ 10239533 (-)
AMCG00002284 NA coding upstream 163426 10240092 ~ 10244785 (-)
AMCG00002292 NA coding upstream 315060 10391726 ~ 10403880 (-)
G122131 NA non-coding downstream 215536 9848235 ~ 9851376 (-)
G122061 tardbp,LOC107716231,LOC107586522 non-coding downstream 445440 9621028 ~ 9621472 (-)
G122037 NA non-coding downstream 779325 9283969 ~ 9287587 (-)
G122019 NA non-coding downstream 853483 9138447 ~ 9213429 (-)
G121935 NA non-coding downstream 1048585 9018126 ~ 9018327 (-)
G122226 NA non-coding upstream 146547 10223213 ~ 10224982 (-)
G122302 NA non-coding upstream 673745 10750411 ~ 10750781 (-)
G122319 NA non-coding upstream 735520 10812186 ~ 10813876 (-)
G122376 NA non-coding upstream 1190898 11267564 ~ 11274527 (-)
G122432 NA non-coding upstream 1330858 11407524 ~ 11409586 (-)
AMCG00002279 NA other downstream 213837 9836918 ~ 9853075 (-)
AMCG00002276 NA other downstream 233688 9830519 ~ 9833224 (-)
AMCG00002275 ube4b,LOC107681967,LOC107570768 other downstream 265804 9757425 ~ 9801108 (-)
AMCG00002265 NA other downstream 446785 9608750 ~ 9620127 (-)
AMCG00002223 NA other downstream 2227501 7826641 ~ 7839411 (-)
AMCG00002288 NA other upstream 193223 10269889 ~ 10279984 (-)
AMCG00002301 NA other upstream 761138 10837804 ~ 10847201 (-)
AMCG00002317 plekhm2 other upstream 1437334 11514000 ~ 11527918 (-)
AMCG00002327 spen,LOC108414948,LOC106565133,LOC107591084,LOC107737540 other upstream 1571245 11647911 ~ 11685089 (-)
G122597 NA other upstream 1654951 11731617 ~ 11734324 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_022445 tmem201 coding NC_007134.7 CM002907.2 29827134 ~ 29858087 (-)
grasscarp (Ctenopharyngodon idella) CI01000001_11957291_11972213 TMEM201 coding CI01000001 null 11956592 ~ 11972549 (-)