AMCG00002286


Basic Information

Item Value
gene id AMCG00002286
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 10024419 ~ 10030406 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002286
ATGTCAACAGATCACTTAAAAGTGATCAATCTCAGGCGGGTGAAGAGACCCTACAGACCCCCCTCGGGGCCCTACCTGCCGGGGAAGCCTTGTCTGAACTATGCGGATCCTTATTACTTGCACCAGGCGCCGAAGTACTTGCAGGCGCCCTTTGGCAGTAACTCCTGGTCTCTGGGACAGTCCAGCCCGTCCATGAGCTACCAGCACCCCCAGCCCGGCAACGGGGGAGGCAGCCCTGTGTCCATGAACGGCTACTGCAGCTCCCCGGTGAACGGATACGCCAGCCACCACCTGCACCCGTCCTATAGCGCTTACCACCGACACCAGGGTCTTCTGGTGTCCCACTCGGGCGGGTCCTACACGGGCATCACTCAGCCCATCAGTCCCGGCGGAGCCTCGGCGTCACCCGGCGGCTTTCACCAGCTGTCCGGctccagacagacagaaatgtCGCTGATGCATTATTATGATTGA

Function

GO:

id name namespace
GO:0008233 peptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002286 True 474 mRNA 0.60 2 10024419 10030406

Neighbor

gene id symbol gene type direction distance location
AMCG00002280 NA coding downstream 17848 9977776 ~ 10006571 (-)
AMCG00002277 NA coding downstream 217121 9802308 ~ 9807298 (-)
AMCG00002268 NA coding downstream 299153 9693760 ~ 9725266 (-)
AMCG00002269 kif1b coding downstream 331444 9661508 ~ 9692975 (-)
AMCG00002270 pgd,LOC107716232,LOC107681986 coding downstream 373809 9643246 ~ 9650610 (-)
AMCG00002285 NA coding upstream 36506 10066912 ~ 10076666 (-)
AMCG00002283 slc25a33,LOC107708828 coding upstream 48751 10079157 ~ 10093103 (-)
AMCG00002282 spsb1,LOC107716103,LOC107687410,LOC107703063,LOC107591103,LOC107737563,LOC103042472 coding upstream 159357 10189763 ~ 10197544 (-)
AMCG00002281 NA coding upstream 194882 10225288 ~ 10239533 (-)
AMCG00002284 NA coding upstream 209686 10240092 ~ 10244785 (-)
G122131 NA non-coding downstream 173043 9848235 ~ 9851376 (-)
G122061 tardbp,LOC107716231,LOC107586522 non-coding downstream 402947 9621028 ~ 9621472 (-)
G122037 NA non-coding downstream 736832 9283969 ~ 9287587 (-)
G122019 NA non-coding downstream 810990 9138447 ~ 9213429 (-)
G121935 NA non-coding downstream 1006092 9018126 ~ 9018327 (-)
G122226 NA non-coding upstream 192807 10223213 ~ 10224982 (-)
G122302 NA non-coding upstream 720005 10750411 ~ 10750781 (-)
G122319 NA non-coding upstream 781780 10812186 ~ 10813876 (-)
G122376 NA non-coding upstream 1237158 11267564 ~ 11274527 (-)
G122432 NA non-coding upstream 1377118 11407524 ~ 11409586 (-)
AMCG00002279 NA other downstream 171344 9836918 ~ 9853075 (-)
AMCG00002276 NA other downstream 191195 9830519 ~ 9833224 (-)
AMCG00002275 ube4b,LOC107681967,LOC107570768 other downstream 223311 9757425 ~ 9801108 (-)
AMCG00002265 NA other downstream 404292 9608750 ~ 9620127 (-)
AMCG00002223 NA other downstream 2185008 7826641 ~ 7839411 (-)
AMCG00002288 NA other upstream 239483 10269889 ~ 10279984 (-)
AMCG00002301 NA other upstream 807398 10837804 ~ 10847201 (-)
AMCG00002317 plekhm2 other upstream 1483594 11514000 ~ 11527918 (-)
AMCG00002327 spen,LOC108414948,LOC106565133,LOC107591084,LOC107737540 other upstream 1617505 11647911 ~ 11685089 (-)
G122597 NA other upstream 1701211 11731617 ~ 11734324 (-)

Expression


Co-expression Network