AMCG00002309


Basic Information

Item Value
gene id AMCG00002309
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 11214084 ~ 11244980 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002309
ATGGCATCCTCCTGTGAGCCCAGCACTGGGTACATGCTGGCGGGGCTGCCATTGTTCCCAGTTATATTTGAGGGAGCCGTCGAGCTCCCAGTCGGACACTCCGCCGCGTCCCGGTCTGATCTGGGAGTGACATTGACTTTCAACCGGTCTGTCGTCAAACTGGCGGGGGTTGTCGATGCTCGTCTAGACCCTTCACTGGTGCAAGAGCCGCACAGGACATTAAACGTTGTCAGCACGCCTGGCCTGCGCTCAGCCACGGTCTCGGTCACCTGCACATCTGTGAGTGTCATGTGGTTTCACCCCAACATCACTGGGATAGAAGCAGAACAGCTACTCCTGACCAGGGGGGTGCATGGCAGTTTTCTTGCCCGGCCAAGCAAGAGCAACCCAGGAGACTTCACGCTCTCCGTCAGGCCTGCCCTGGGTGAGCGACAGCAGGGGCAGATAGCTCACTGTAACATCACCCTCGTTCTGGCTCtgcacacccccccacccctccacatGCCGCAGCCCTTATATCAGAATATCAGCACTGGGTCACGCTCTGCTGATGAGATGGAACTGGTGACATCGCCGGGTTCACTTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002309 True 588 mRNA 0.58 4 11214084 11244980

Neighbor

gene id symbol gene type direction distance location
AMCG00002308 NA coding upstream 12083 11144009 ~ 11202001 (+)
AMCG00002306 NA coding upstream 73397 11127459 ~ 11140687 (+)
AMCG00002305 NA coding upstream 112080 11097491 ~ 11102004 (+)
AMCG00002304 agrn coding upstream 218373 10992509 ~ 10995711 (+)
AMCG00002300 NA coding upstream 379273 10820245 ~ 10834811 (+)
AMCG00002307 LOC105898973,LOC106572187,LOC103032744 coding downstream 10752 11255732 ~ 11271329 (+)
AMCG00002314 NA coding downstream 147975 11392955 ~ 11406464 (+)
AMCG00002316 NA coding downstream 320029 11565009 ~ 11587894 (+)
AMCG00002323 NA coding downstream 357230 11602210 ~ 11612235 (+)
AMCG00002325 NA coding downstream 378801 11623781 ~ 11628341 (+)
G122328 her9,LOC107687478,LOC107716081,LOC107593950,LOC107703052,LOC107737700,LOC107591146 non-coding upstream 286141 10870773 ~ 10927943 (+)
G122236 NA non-coding upstream 887433 10323529 ~ 10326651 (+)
G122198 NA non-coding upstream 1081884 10079747 ~ 10132200 (+)
G122126 ctnnbip1 non-coding upstream 1315204 9862956 ~ 9898880 (+)
G122119 NA non-coding upstream 1383406 9829754 ~ 9830678 (+)
G122389 NA non-coding downstream 89951 11334931 ~ 11348638 (+)
G122417 NA non-coding downstream 212664 11457644 ~ 11470525 (+)
G122467 NA non-coding downstream 277194 11522174 ~ 11522631 (+)
G122468 NA non-coding downstream 277892 11522872 ~ 11523114 (+)
G122469 NA non-coding downstream 278247 11523227 ~ 11523622 (+)
AMCG00002296 NA other upstream 460191 10714799 ~ 10753893 (+)
AMCG00002294 rere other upstream 609245 10567912 ~ 10604839 (+)
AMCG00002272 NA other upstream 1362772 9844205 ~ 9851312 (+)
AMCG00002245 NA other upstream 2421606 8738771 ~ 8792478 (+)
AMCG00002215 NA other upstream 3802854 7393800 ~ 7411230 (+)
AMCG00002310 NA other downstream 112572 11357552 ~ 11359840 (+)
AMCG00002311 ttll10 other downstream 120634 11365614 ~ 11379568 (+)
G122482 NA other downstream 384032 11629012 ~ 11630892 (+)
AMCG00002331 NA other downstream 443620 11688600 ~ 11694165 (+)
AMCG00002339 NA other downstream 465470 11710450 ~ 11715372 (+)

Expression


Co-expression Network