AMCG00002313


Basic Information

Item Value
gene id AMCG00002313
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 11278426 ~ 11279133 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002313
ATGGCGGCGATGTCCCAGGTGTGGCACACGGAAGACCCCCCGAGGGAGGAGCAGGAGGTGGACGCGGAGAGGGGTGGGGCAGGGGCCGGGCAGCCCGAGTGCTCCATCTGTTTCAACACCTATGACAACGTGTTCAAGACGCCCAAGGTGCTGCAGTGCACACACACCTTCTGCCTGGAGTGCCTCTCCAGACTGACGGCCGCGCTGTCCCTGGAGCAGGACACCAGCCAGATACCCTGCCCTCTGTGCCGCCAACTCACCTCCGTCCCGGAGAGGGGTCCCCCGGCCTTGACCACGAGCCAGGAGGTGCTGTGCAAGCTGCCCGCCCACCTGCAACATGAGGAGCCCGTGTGGATGGAGGGGGAGAAGCTGTGCTACAAGCGGCCTCTCGATGCCAACAACTCAGACTTCTGCATCTGCATCGACATTGGCATCTCCAAACAGGAGGCCGCGCTGCCCGAGCTCAGCACCGTCCGGCCACGGGGCCTGTGGGCGCGGCTGGGGCTGCTGACGGACTGGAAGCGCCTGGTGCTCTTCTTCATCCTCATTGTGATGCTCGTCTGCATCGTCCTCTGGCCGCTGCAGTGTGTCTTCAGCACGGGGAGCCTGCGCTGCTTCAGCCGGGTCACCACCACACCTGTCACCACCACTCAcaaccccaaccccacccccactgcGATGTCACAGTTATTCACAGCAGATCAGTGA

Function

GO:

id name namespace
GO:0004055 argininosuccinate synthase activity molecular_function

KEGG:

id description
ko04520 Adherens junction

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002313 True 708 mRNA 0.64 1 11278426 11279133

Neighbor

gene id symbol gene type direction distance location
AMCG00002303 NA coding downstream 349423 10926868 ~ 10929003 (-)
AMCG00002302 NA coding downstream 488471 10755832 ~ 10789955 (-)
AMCG00002292 NA coding downstream 874546 10391726 ~ 10403880 (-)
AMCG00002284 NA coding downstream 1033641 10240092 ~ 10244785 (-)
AMCG00002281 NA coding downstream 1038893 10225288 ~ 10239533 (-)
AMCG00002312 NA coding upstream 13961 11293094 ~ 11304845 (-)
AMCG00002315 NA coding upstream 179930 11459063 ~ 11467699 (-)
AMCG00002319 NA coding upstream 205626 11484759 ~ 11505246 (-)
AMCG00002318 NA coding upstream 226742 11505875 ~ 11509991 (-)
AMCG00002322 NA coding upstream 252145 11531278 ~ 11532015 (-)
G122376 NA non-coding downstream 3899 11267564 ~ 11274527 (-)
G122319 NA non-coding downstream 464550 10812186 ~ 10813876 (-)
G122302 NA non-coding downstream 527645 10750411 ~ 10750781 (-)
G122226 NA non-coding downstream 1053444 10223213 ~ 10224982 (-)
G122131 NA non-coding downstream 1427050 9848235 ~ 9851376 (-)
G122432 NA non-coding upstream 128391 11407524 ~ 11409586 (-)
G122438 NA non-coding upstream 170433 11449566 ~ 11449791 (-)
G122530 NA non-coding upstream 322839 11601972 ~ 11628435 (-)
G122548 NA non-coding upstream 435276 11714409 ~ 11716145 (-)
G122551 NA non-coding upstream 439397 11718530 ~ 11718969 (-)
AMCG00002301 NA other downstream 431225 10837804 ~ 10847201 (-)
AMCG00002288 NA other downstream 998442 10269889 ~ 10279984 (-)
AMCG00002279 NA other downstream 1425351 9836918 ~ 9853075 (-)
AMCG00002276 NA other downstream 1445202 9830519 ~ 9833224 (-)
AMCG00002275 ube4b,LOC107681967,LOC107570768 other downstream 1477318 9757425 ~ 9801108 (-)
AMCG00002317 plekhm2 other upstream 234867 11514000 ~ 11527918 (-)
AMCG00002327 spen,LOC108414948,LOC106565133,LOC107591084,LOC107737540 other upstream 368778 11647911 ~ 11685089 (-)
G122597 NA other upstream 452484 11731617 ~ 11734324 (-)
AMCG00002350 tmem240a,tmem240,LOC107687438,LOC108275582,LOC105898995,LOC107593924,LOC107673083 other upstream 569337 11848470 ~ 11854891 (-)
AMCG00002351 NA other upstream 590474 11869607 ~ 11872862 (-)

Expression


Co-expression Network