AMCG00002314


Basic Information

Item Value
gene id AMCG00002314
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 11392955 ~ 11406464 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002314
ATGGGCTGCTGCAGTGTGACAGCGAGACACTCCGGGACCGACCCCGTGGGAGCTGACGAGATCGAACTGCTGGAGGAAGTGCTGTGGGGTCAAACCAAGGAAGATCTGCACCACAAGATTTACACTCAGCACATCGAGGCCTGGGAGGGTCAGCCTGTCCACTCTTATGGAGAAATCGCCTGGTCCTCCTTGGTGTCTCTACACAACCGTTACACGCAGGAAAGCTGTGAGCGATACCTGGTGCTGTTCTCTTTCCATTTGCTGATCTTGGCGCTGGATGACAGCAAGCGAGAGTTCATTTACCAGGACAACGCCGCCACGGACATGTTCGAAATCTCGGGGCCAATGGTGGACTCAAAGATAGTGATCTGTGCCAACCCGGCCGAGCTGAGGACCTGGCTGGACAACATCCAGGAGAGGATCGGCAGGGCCACCAGCCAGCAGCTCTGCCCCTTCAACAGCATCCTCTCCTTCCTGGTCCCATGCGATGAGAAGTGGAAGAAGGAGGAGCTGAAGAGGTATTTACTACGGACGCCCATCTGGAACTGGGAAGGGAAACCCATACAGCACCTGGGCCCGGTGGGATACCTCTCTCTGGTCCACATCTCAGGCGCACAGAGGACGGGTTCAAAGGAGCGCCTCCTAGTGATCTTCCCTCAAGACCTGCTGCTGCTCTCCATTGACAGCCAGAGGGTCCAGGTCCGATACGAGGGAAGGCTGCCTCTGAAGAGCATCAAAGCCCTGGAGAGGTCAGCGCTGCCAGGCAGGCTGGAGTTTGAGATCACAGGTCTGTACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002314 True 798 mRNA 0.57 8 11392955 11406464

Neighbor

gene id symbol gene type direction distance location
AMCG00002307 LOC105898973,LOC106572187,LOC103032744 coding upstream 121626 11255732 ~ 11271329 (+)
AMCG00002309 NA coding upstream 147975 11214084 ~ 11244980 (+)
AMCG00002308 NA coding upstream 190954 11144009 ~ 11202001 (+)
AMCG00002306 NA coding upstream 252268 11127459 ~ 11140687 (+)
AMCG00002305 NA coding upstream 290951 11097491 ~ 11102004 (+)
AMCG00002316 NA coding downstream 158545 11565009 ~ 11587894 (+)
AMCG00002323 NA coding downstream 195746 11602210 ~ 11612235 (+)
AMCG00002325 NA coding downstream 217317 11623781 ~ 11628341 (+)
AMCG00002324 zbtb17 coding downstream 230349 11636813 ~ 11644784 (+)
AMCG00002329 NA coding downstream 325141 11731605 ~ 11738113 (+)
G122389 NA non-coding upstream 44317 11334931 ~ 11348638 (+)
G122328 her9,LOC107687478,LOC107716081,LOC107593950,LOC107703052,LOC107737700,LOC107591146 non-coding upstream 465012 10870773 ~ 10927943 (+)
G122236 NA non-coding upstream 1066304 10323529 ~ 10326651 (+)
G122198 NA non-coding upstream 1260755 10079747 ~ 10132200 (+)
G122126 ctnnbip1 non-coding upstream 1494075 9862956 ~ 9898880 (+)
G122417 NA non-coding downstream 51180 11457644 ~ 11470525 (+)
G122467 NA non-coding downstream 115710 11522174 ~ 11522631 (+)
G122468 NA non-coding downstream 116408 11522872 ~ 11523114 (+)
G122469 NA non-coding downstream 116763 11523227 ~ 11523622 (+)
G122470 NA non-coding downstream 118768 11525232 ~ 11528098 (+)
AMCG00002311 ttll10 other upstream 13387 11365614 ~ 11379568 (+)
AMCG00002310 NA other upstream 33115 11357552 ~ 11359840 (+)
AMCG00002296 NA other upstream 639062 10714799 ~ 10753893 (+)
AMCG00002294 rere other upstream 788116 10567912 ~ 10604839 (+)
AMCG00002272 NA other upstream 1541643 9844205 ~ 9851312 (+)
G122482 NA other downstream 222548 11629012 ~ 11630892 (+)
AMCG00002331 NA other downstream 282136 11688600 ~ 11694165 (+)
AMCG00002339 NA other downstream 303986 11710450 ~ 11715372 (+)
G122582 NA other downstream 428975 11835439 ~ 11836169 (+)
AMCG00002355 NA other downstream 488009 11894473 ~ 11898701 (+)

Expression


Co-expression Network