AMCG00002318


Basic Information

Item Value
gene id AMCG00002318
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 11505875 ~ 11509991 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002318
CAGGGTTAGGGGGTGAGGTGCTGAAAGGTGCAGGGACTGGGCAGCAGGCAGGTGAGTGATGATGCAATGCTTTTCCAGGTGCTGATGGATTTGTTCTCCAAGCTGCACTCACCCTCCAGCTCCCCCCGCAGACAGGGGGCAGTGAAGCGCCACACCTCCTGCCCCAGCAGGGGATCGATGCGGTGTGGTCTGGGCAAGGGGGCACAGCGCGACCTGGCTAACTTCTTCCGGGTCAGGAGGAGGCCTAATCTAGAGCGCAGGAAGTCCTTCTCCCTGGAAGAGGTGTTGGGCACCGCTTGCCAGGAGGGGGATGTGCCTGCTGTCCCTGCCCTCCCGCTGTCACTGATGGAGGACCAAGTGGGTCCTGGGGCACAAGGGGTGGCTGAACAGGAGCTCAGCGATGCAGCATTTGATCTGAGCTTTGGAGAAGGATGGAGAGAGACTGGGGCAGCCACAGAGACCGAGACACAGTCCGAGAGTGACGGAGACTTCCCCAGTGAACAGCTCACCCTGGAATCCAAGTTTCTCCGTGCCTtgCCCCTGTATCAGGAGTACTGGCTGCAGTGTTTGCAGCAGGAGATGCAGAGGAGGAGGCAGCGGCaccactctctccctcagctGGCCGCCACCTTGGCCATCCCCAGTCTGCTGTCCTGCTCCTTGACCTCGCTGACCACACCCACCGCCACCAGCTCCCTGCCCCAGCCCCCCTCACACTCACGCTCCCTGGGAGACGACCCCTGCTGCTTCTGGCAGGAGCTGCCTGAGGTTCGAGAAAGTGGCCTGCTGGACTCGATGACCTTGAGGCAGAAAAGGCAGCAGGAGGCCATGTTTGAACTCATCGTGTCTGAGGCCTCGTACCTGAAGAGCCTGACGGTGGTGGTGAATCACTTCCTGGGGTCGTCAGAGCTGCGTCAGGCCCTGCAGCCGCTGGAGCTGCACACCCTCTTCTCCAACCTGCCACGTGTCCGGGAGGTCAGCCAAAGgttcTTCTTGTCTCTGGAGAGCCGTCTGGAGGAGAGTCTGTTGATCTCTGACCTCAGTGACATCGTGCTGCATCACCGTGACGCCCTCAGGAGTGTGTATGTGCCCTACGTCACCAACCAGATGTACCAGGAGGCCCTCGCCCAGCGCCTGCTGAAGTCGAATGAGCCATTCCTGGCCGTGGTGCGCAGGCTGGAGAGCGCCCCGCTGTGTCAGAGACAGAACCTGAAGTCCTTCCTGGTGCTGCCCTTCCAGAGGATCACGCGGCTCCGCATCATCCTAGAGATTGTGGAGGAGTGCAACAGCAGCGTGTCCAGGATGAGGCAGACTGAGGAGCTGGTGCTGCTGGAGAAGCTGATGGACTTCAGCAGAGTCAAGTTGCTGCCACTGATCAGTAGGGGGCGCTGGCTGGTGCGGGAAGGGACACTGCAACAGGTGATGGTGGAGGAGTGGCCCGGGGGGGCGCACCGGAGCAGGGTCTCTCTGAGGGCCATCCACCTGCACCTCTTCAAcgacctgctgctgctgtcacaCAGGGAGGAGGGCAGGTTTGTCGTGGAGTACTATGCTGGTCCCAGTAATGTCAGGGCGGAGCATCTGGCAGCCAAGCCCCTGGGTCTGCCCAGCGAGAGCTTCCTGCTGCACATGAGCCATACCACCCACCCCACTGCCATCATCCTGCACACATCGAACAGCACAGAACTGCACCACTGGATCAGAGCCATTTCACCACAGAGTGGCATAGAGGGGGGGCAGGCTTGACAGGTAGCGGAGTGCTGTCTCCCTGCTGTGGCAGTTCCAGGAGTGGAGGGCCAGAGAGGGATTGCTGCCTTACAGAGAGACCTGGACTGGGGTGGCCTTCTGGGAGCCCAGCgttattctactgcactgttgcACTGTTCTACActtctgtactgcactgtactgcacttctTTACTACTGTACCCACTTATTCTGTATCTGAGGGCTCTGTGTGAGCTGCCCCAGAGTCCTGCCACCCCCAAGTTACTATGCACTGCTCTTCTAGCATCTCATGTGTTgtgaattttaataataa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002318 True 2042 mRNA 0.60 12 11505875 11509991

Neighbor

gene id symbol gene type direction distance location
AMCG00002319 NA coding downstream 629 11484759 ~ 11505246 (-)
AMCG00002315 NA coding downstream 38176 11459063 ~ 11467699 (-)
AMCG00002312 NA coding downstream 201030 11293094 ~ 11304845 (-)
AMCG00002313 NA coding downstream 226742 11278426 ~ 11279133 (-)
AMCG00002303 NA coding downstream 576872 10926868 ~ 10929003 (-)
AMCG00002322 NA coding upstream 21287 11531278 ~ 11532015 (-)
AMCG00002321 LOC106582762 coding upstream 23559 11533550 ~ 11541279 (-)
AMCG00002320 NA coding upstream 32700 11542691 ~ 11546457 (-)
AMCG00002328 NA coding upstream 102405 11612396 ~ 11620659 (-)
AMCG00002326 NA coding upstream 119158 11629149 ~ 11630909 (-)
G122438 NA non-coding downstream 56084 11449566 ~ 11449791 (-)
G122432 NA non-coding downstream 96289 11407524 ~ 11409586 (-)
G122376 NA non-coding downstream 231348 11267564 ~ 11274527 (-)
G122319 NA non-coding downstream 691999 10812186 ~ 10813876 (-)
G122302 NA non-coding downstream 755094 10750411 ~ 10750781 (-)
G122530 NA non-coding upstream 91981 11601972 ~ 11628435 (-)
G122548 NA non-coding upstream 204418 11714409 ~ 11716145 (-)
G122551 NA non-coding upstream 208539 11718530 ~ 11718969 (-)
G122632 NA non-coding upstream 334401 11844392 ~ 11845671 (-)
G122633 NA non-coding upstream 337090 11847081 ~ 11848192 (-)
AMCG00002301 NA other downstream 658674 10837804 ~ 10847201 (-)
AMCG00002288 NA other downstream 1225891 10269889 ~ 10279984 (-)
AMCG00002279 NA other downstream 1652800 9836918 ~ 9853075 (-)
AMCG00002276 NA other downstream 1672651 9830519 ~ 9833224 (-)
AMCG00002275 ube4b,LOC107681967,LOC107570768 other downstream 1704767 9757425 ~ 9801108 (-)
AMCG00002317 plekhm2 other upstream 4009 11514000 ~ 11527918 (-)
AMCG00002327 spen,LOC108414948,LOC106565133,LOC107591084,LOC107737540 other upstream 137920 11647911 ~ 11685089 (-)
G122597 NA other upstream 221626 11731617 ~ 11734324 (-)
AMCG00002350 tmem240a,tmem240,LOC107687438,LOC108275582,LOC105898995,LOC107593924,LOC107673083 other upstream 338479 11848470 ~ 11854891 (-)
AMCG00002351 NA other upstream 359616 11869607 ~ 11872862 (-)

Expression


Co-expression Network